RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EURLQ9NYK6 297 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SLC17A7Q9P2U7 560 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 NXT1Q9UKK6 140 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 CES1P1Q9UKY3 287 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ST3GAL6Q9Y274 331 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 PRG3Q9Y2Y8 225 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 RANBP2P49792 3224 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 LRRC37A2A6NM11 1700 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ALPK3Q96L96 1907 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CENPFP49454 3210 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 A0A0G2JN53 185 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 FAM166BA8MTA8 275 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ANKRD63C9JTQ0 380 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 F8VZ95 297 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 MKRN2OSH3BPM6 223 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ZNF593O00488 134 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 GABRPO00591 440 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 PLPP3O14495 311 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ITGB1BP1O14713 200 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 FAM189A1O60320 539 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 SLC16A7O60669 478 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 RAB3DO95716 219 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 LDOC1O95751 146 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 PRB2P02812 416 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 GLAP06280 429 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ZNF806P0C7X5 589 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OCMP0CE72 109 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 CHTF8P0CG12 524 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR5H8P0DN80 308 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 PGAM1P18669 254 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ELK1P19419 428 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 RAB3BP20337 219 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 PSMB1P20618 241 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 ARL2P36404 184 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 RANBP1P43487 201 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR3A4PP47883 348 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 TUFMP49411 452 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 PRLHRP49683 370 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 HCCSP53701 268 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 FGF8P55075 233 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR2B6P58173 313 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR2B8PP59922 312 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 DSTNP60981 165 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 RPL31P62899 125 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 RPL18AQ02543 176 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 KDSRQ06136 332 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 SLAMF1Q13291 335 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 EIF4EBP2Q13542 120 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 MAD2L1BPQ15013 274 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 NSDHLQ15738 373 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 SGCAQ16586 387 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 C2orf83Q53S99 150 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 FRMPD2BQ6IN97 320 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 LCN12Q6JVE5 192 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ABHD13Q7L211 337 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 MRPL55Q7Z7F7 128 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 TMEM179BQ7Z7N9 219 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CYP4Z1Q86W10 505 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 THOC6Q86W42 341 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 CDKL3Q8IVW4 592 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 FAM71AQ8IYT1 594 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CA13Q8N1Q1 262 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 MREGQ8N565 214 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CDRT4Q8N9R6 151 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CYB561A3Q8NBI2 242 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 NECAP1Q8NC96 275 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR5AR1Q8NGP9 310 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR10Z1Q8NGY1 313 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR51A7Q8NH64 312 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 C2orf15Q8WU43 125 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 GALNT14Q96FL9 552 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 C8orf76Q96K31 380 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 BTN2A3PQ96KV6 586 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ZFP3Q96NJ6 502 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 LXNQ9BS40 222 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 COPS4Q9BT78 406 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 TIPINQ9BVW5 301 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CCDC94Q9BW85 323 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 GABARAPL3Q9BY60 117 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 PARP12Q9H0J9 701 aaKnown RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 WDR55Q9H6Y2 383 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 ASB8Q9H765 288 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 REEP1Q9H902 201 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CCL28Q9NRJ3 127 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 SDHAF2Q9NX18 166 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 RHBDL2Q9NX52 303 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 UBAP1Q9NZ09 502 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 MAT2BQ9NZL9 334 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 SLC22A14Q9Y267 594 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 CFL2Q9Y281 166 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 ACOT9Q9Y305 439 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 OR51B2Q9Y5P1 312 aa2.19□□□□□ -2.06
HERC4-215ENST00000515753 PUS1Q9Y606 427 aaKnown RBP eCLIP2.19□□□□□ -2.06
HERC4-215ENST00000515753 V9GYY5 206 aaPredicted RBP2.19□□□□□ -2.06
HERC4-215ENST00000515753 DENND4AQ7Z401 1863 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 NAV1Q8NEY1 1877 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 SCN10AQ9Y5Y9 1956 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TRAV8-7A0A075B6U6 113 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 IGHV3OR16-9A0A0B4J2B5 98 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms