RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 MPZL2O60487 215 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 PPIAL4GP0DN37 164 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 IGHV4-38-2P0DP08 117 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 PEX2P28328 305 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 TGM4P49221 684 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 NANOS3P60323 173 aaKnown RBP13.05□□□□□ -0.32
SERF1B-208ENST00000515588 SCGB2A2Q13296 93 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 ATPAF1Q5TC12 328 aaPredicted RBP13.05□□□□□ -0.32
SERF1B-208ENST00000515588 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
SERF1B-208ENST00000515588 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 OR2G2Q8NGZ5 317 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 UPRTQ96BW1 309 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 C19orf24Q9BVV8 132 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 FRRS1LQ9P0K9 344 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF69Q9UC07 566 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 NUP50Q9UKX7 468 aa13.05□□□□□ -0.32
SERF1B-208ENST00000515588 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 A0A0A6YYJ9 748 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 LOC107986453A0A1B0GWG9 222 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 SYNGR1O43759 233 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 ENSAO43768 121 aaKnown RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 WBP4O75554 376 aaKnown RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 CLIC3O95833 236 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 SELLP14151 372 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 CD276Q5ZPR3 534 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 KCTD20Q7Z5Y7 419 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 LHFPL3Q86UP9 236 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 ANGPTL6Q8NI99 470 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF418Q8TF45 676 aaPredicted RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 C4orf36Q96KX1 117 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 Q96MT0 163 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 MRPS18AQ9NVS2 196 aaKnown RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 DNAJB11Q9UBS4 358 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 PCDHGB1Q9Y5G3 927 aa13.04□□□□□ -0.32
SERF1B-208ENST00000515588 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
SERF1B-208ENST00000515588 ANKRD61A6NGH8 418 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 J3QLW9 94 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 IGHA1P01876 353 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF19P17023 458 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 GLRA1P23415 457 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 HILS1P60008 231 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 FGF12P61328 243 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 IKZF1Q13422 519 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 GALEQ14376 348 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 UBE2V2Q15819 145 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 BPIFB2Q8N4F0 458 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF555Q8NEP9 628 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 OR52I1Q8NGK6 324 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ST8SIA4Q92187 359 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 GAFA1Q96PS6 74 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ISG20L2Q9H9L3 353 aaKnown RBP13.03□□□□□ -0.32
SERF1B-208ENST00000515588 ESM1Q9NQ30 184 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 NLKQ9UBE8 527 aa13.03□□□□□ -0.32
SERF1B-208ENST00000515588 IGKV1D-17A0A075B6S4 117 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 J3QT63 122 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 PLATP00750 562 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 UBCP0CG48 685 aaKnown RBP13.02□□□□□ -0.33
SERF1B-208ENST00000515588 MMP9P14780 707 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 FPR2P25090 351 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 HAAOP46952 286 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 RAB40BQ12829 278 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 DGUOKQ16854 277 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF691Q5VV52 312 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF788Q6ZQV5 615 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ANGPTL5Q86XS5 388 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF573Q86YE8 665 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 OR10AC1Q8NH08 325 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ADAT3Q96EY9 351 aaPredicted RBP13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ADI1Q9BV57 179 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ALG8Q9BVK2 526 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 CHST5Q9GZS9 411 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 RPUSD1Q9UJJ7 312 aaKnown RBP13.02□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF222Q9UK12 451 aa13.02□□□□□ -0.33
SERF1B-208ENST00000515588 RPL36Q9Y3U8 105 aaKnown RBP13.02□□□□□ -0.33
SERF1B-208ENST00000515588 IGKV1-27A0A075B6S5 117 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 TRAV40A0A0B4J280 105 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 OR4C45A6NMZ5 311 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 OR2AT4A6NND4 320 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 ZNF879B4DU55 563 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 E9PI62 339 aa13.01□□□□□ -0.33
SERF1B-208ENST00000515588 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
SERF1B-208ENST00000515588 FADS2O95864 444 aaKnown RBP13.01□□□□□ -0.33
SERF1B-208ENST00000515588 ECDO95905 644 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms