RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 V9GYS6 101 aa9.51□□□□□ -0.89
VCAN-212ENST00000515397 A0A0A6YYJ9 748 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 LOC100130705A0A1B0GUX0 176 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 FAM230AA0A1W2PPH8 454 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 A0A1W2PRD5 423 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 A0A1W2PRF3 423 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 A0A1W2PRM7 423 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 DAPL1A0PJW8 107 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 ZNF879B4DU55 563 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 J3QLW9 94 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 ENSAO43768 121 aaKnown RBP9.5□□□□□ -0.89
VCAN-212ENST00000515397 MTRF1O75570 445 aaKnown RBP9.5□□□□□ -0.89
VCAN-212ENST00000515397 TOX4O94842 621 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 CLIC3O95833 236 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 PLATP00750 562 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 ATP6V1B1P15313 513 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
VCAN-212ENST00000515397 ZNF19P17023 458 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 GABRB1P18505 474 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 CPT2P23786 658 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 HAAOP46952 286 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 NPY4RP50391 375 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 OCLNQ16625 522 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 DGUOKQ16854 277 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 CD276Q5ZPR3 534 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 LPCAT4Q643R3 524 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 USP43Q70EL4 1123 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 DOK3Q7L591 496 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 C10orf67Q8IYJ2 551 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 ZNRF1Q8ND25 227 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 OR10Z1Q8NGY1 313 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 H1FXQ92522 213 aaKnown RBP9.5□□□□□ -0.89
VCAN-212ENST00000515397 C1orf147Q96MC9 270 aaPredicted RBP9.5□□□□□ -0.89
VCAN-212ENST00000515397 GAFA1Q96PS6 74 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 TRIM36Q9NQ86 728 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 FAM118AQ9NWS6 357 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 ONECUT1Q9UBC0 465 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 NLKQ9UBE8 527 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 KAAG1Q9UBP8 84 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.5□□□□□ -0.89
VCAN-212ENST00000515397 MYRFQ9Y2G1 1151 aa9.5□□□□□ -0.89
VCAN-212ENST00000515397 IGKV1D-17A0A075B6S4 117 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 A0A1B0GVI7 797 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 OR2AT4A6NND4 320 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 J3QRE1 110 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 DLGAP1O14490 977 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 SYT7O43581 403 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 NDUFB3O43676 98 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 SULT1C4O75897 302 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 PSG2P11465 335 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 MMP9P14780 707 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 NDUFB7P17568 137 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 TGM4P49221 684 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 NANOS3P60323 173 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 ACTG1P63261 375 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 ZNF91Q05481 1191 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 BAMBIQ13145 260 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 SMN1Q16637 294 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 TMEM42Q69YG0 159 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 RBMS3Q6XE24 437 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 KRT74Q7RTS7 529 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 OR2G2Q8NGZ5 317 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 OR10AC1Q8NH08 325 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 RHOXF1Q8NHV9 184 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 ANGPTL6Q8NI99 470 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 ZNF671Q8TAW3 534 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 GCDHQ92947 438 aaPredicted RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 LHX4Q969G2 390 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 TMIGD2Q96BF3 282 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 WDFY2Q96P53 400 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 ADI1Q9BV57 179 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 CNTD2Q9H8S5 307 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 MOB1AQ9H8S9 216 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 ISG20L2Q9H9L3 353 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 ABCB9Q9NP78 766 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 FRRS1LQ9P0K9 344 aa9.49□□□□□ -0.89
VCAN-212ENST00000515397 RPUSD1Q9UJJ7 312 aaKnown RBP9.49□□□□□ -0.89
VCAN-212ENST00000515397 IGKV1-27A0A075B6S5 117 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 LOC107986453A0A1B0GWG9 222 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 PQLC2LA1A4F0 135 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 DNAJC9-AS1A6NH13 148 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 OR5B21A6NL26 309 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 RFPL4AA6NLU0 287 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 E9PI62 339 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 RFPL4AL1F8VTS6 287 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 F8VVB4 439 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 F8VWA3 439 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 TRIM77I1YAP6 450 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 SLC16A6O15403 523 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 PPIAL4GP0DN37 164 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 CALCBP10092 127 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 CCL1P22362 96 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ISL1P61371 349 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 TMED1Q13445 227 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 LRRC10Q5BKY1 277 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms