RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SLC35E3Q7Z769 313 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 PATL1Q86TB9 770 aaKnown RBP9.15□□□□□ -0.94
SMAD5-210ENST00000515005 LYPD6Q86Y78 171 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 LINC00471Q8N535 108 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 RNF152Q8N8N0 203 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 OR6Q1Q8NGQ2 317 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 OR5P3Q8WZ94 311 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 CLEC7AQ9BXN2 247 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 PYCARDQ9ULZ3 195 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 B9D1Q9UPM9 204 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 CORO2BQ9UQ03 480 aa9.15□□□□□ -0.94
SMAD5-210ENST00000515005 hCG_38984A0A1B0GV85 526 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 OVOL1O14753 267 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 BRI3O95415 125 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 IGHG2P01859 326 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 CRABP1P29762 137 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 PRDX2P32119 198 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 RPS27P42677 84 aaKnown RBP9.14□□□□□ -0.95
SMAD5-210ENST00000515005 GPR4P46093 362 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 OR1E2P47887 323 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 PRKCDQ05655 676 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 GABPB1Q06547 395 aaPredicted RBP9.14□□□□□ -0.95
SMAD5-210ENST00000515005 FOXE3Q13461 319 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 GPR50Q13585 617 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 TCF23Q7RTU1 214 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 FOXRED2Q8IWF2 684 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 ZNF676Q8N7Q3 588 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 OR1N2Q8NGR9 330 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 UBLCP1Q8WVY7 318 aaPredicted RBP9.14□□□□□ -0.95
SMAD5-210ENST00000515005 SGK3Q96BR1 496 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 RNF170Q96K19 258 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 POLR2J2Q9GZM3 115 aaKnown RBP9.14□□□□□ -0.95
SMAD5-210ENST00000515005 POLR2J3Q9H1A7 115 aaKnown RBP9.14□□□□□ -0.95
SMAD5-210ENST00000515005 HIPK2Q9H2X6 1198 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 SESN1Q9Y6P5 492 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
SMAD5-210ENST00000515005 MAGEA13PA6NCF6 341 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 ZNF850A8MQ14 1090 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 TBX1O43435 398 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
SMAD5-210ENST00000515005 TK1P04183 234 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 ARSBP15848 533 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 NOS3P29474 1203 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 GSK3AP49840 483 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 PRDX4Q13162 271 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 CYP51A1Q16850 503 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 SLC36A3Q495N2 470 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 ZBED5Q49AG3 693 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 GPR139Q6DWJ6 353 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 NANOGP8Q6NSW7 305 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 DNM1P34Q6PK57 102 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 ADCK1Q86TW2 530 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 KIRREL3Q8IZU9 778 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 EME1Q96AY2 570 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 REEP6Q96HR9 211 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 TMEM133Q9H2Q1 129 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 KRCC1Q9NPI7 259 aaPredicted RBP9.13□□□□□ -0.95
SMAD5-210ENST00000515005 NRIP3Q9NQ35 241 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 IER3IP1Q9Y5U9 82 aa9.13□□□□□ -0.95
SMAD5-210ENST00000515005 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 MMP23AO75900 390 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMAD5-210ENST00000515005 ARHGDIBP52566 201 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 ZNF616Q08AN1 781 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 ST3GAL3Q11203 375 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 PMS2P11Q13670 270 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 TIGD6Q17RP2 521 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 SMARCD3Q6STE5 483 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 BAIAP2L2Q6UXY1 529 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 CSNK2A3Q8NEV1 391 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 ZNF488Q96MN9 340 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 ZNF714Q96N38 554 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 OR8B4Q96RC9 309 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 COPS4Q9BT78 406 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 NSRP1Q9H0G5 558 aaKnown RBP9.12□□□□□ -0.95
SMAD5-210ENST00000515005 MRPL22Q9NWU5 206 aaKnown RBP9.12□□□□□ -0.95
SMAD5-210ENST00000515005 MPC1Q9Y5U8 109 aa9.12□□□□□ -0.95
SMAD5-210ENST00000515005 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
SMAD5-210ENST00000515005 TRPC5OSA6NMA1 111 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 LEUTXA8MZ59 168 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 C12orf77C9JDV5 145 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 UBDO15205 165 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 PSPNO60542 156 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 ELANEP08246 267 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 FAM106CPP0CH98 169 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 PSKH1P11801 424 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 GPM6AP51674 278 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 EDDM3BP56851 147 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 STX3Q13277 289 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 FAM53AQ6NSI3 398 aaPredicted RBP9.11□□□□□ -0.95
SMAD5-210ENST00000515005 TBPL2Q6SJ96 375 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 ZBTB49Q6ZSB9 765 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 FUNDC1Q8IVP5 155 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 RASSF5Q8WWW0 418 aa9.11□□□□□ -0.95
SMAD5-210ENST00000515005 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
SMAD5-210ENST00000515005 OR52B2Q96RD2 323 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms