RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF670-ZNF695F2Z2N8 137 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 LOC110117498-PIK3R3F6TDL0 507 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 SPRY1O43609 319 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 ACAA1P09110 424 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 MDKP21741 143 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 GLRA1P23415 457 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 CAV3P56539 151 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 EGR3Q06889 387 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 PRR31Q5SQ13 230 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 BCL2L15Q5TBC7 163 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 PLCXD3Q63HM9 321 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 Q6ZSR3 168 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 SSX6Q7RTT6 188 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 AMIGO2Q86SJ2 522 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 ELMOD2Q8IZ81 293 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 CMTM4Q8IZR5 234 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 Q8N7P7 452 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 OR5A2Q8NGI9 324 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 OR51G2Q8NGK0 314 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 SSMEM1Q8WWF3 244 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 TMIGD2Q96BF3 282 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 MED30Q96HR3 178 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 IL4I1Q96RQ9 567 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 APOL4Q9BPW4 351 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 CHIAQ9BZP6 476 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 H2AFY2Q9P0M6 372 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 SLC25A10Q9UBX3 287 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 WARS2Q9UGM6 360 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 MRM2Q9UI43 246 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 OAZ3Q9UMX2 235 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 MMP24Q9Y5R2 645 aa8.6□□□□□ -1.03
HMGXB3-205ENST00000514469 A0A1B0GTI1 187 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 DHRS7CA6NNS2 312 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 M0R1W7 72 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 MAGEB4O15481 346 aaPredicted RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 MTRF1O75570 445 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 NDUFA7O95182 113 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 NRASP01111 189 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 PSG2P11465 335 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 CCL1P22362 96 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 HTR1FP30939 366 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 ACTR3P61158 418 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 RPL15P61313 204 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 DMRTC1Q5HYR2 192 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF684Q5T5D7 378 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 HAGHLQ6PII5 290 aaPredicted RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 FIP1L1Q6UN15 594 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 PLEKHG7Q6ZR37 379 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 PDZD9Q8IXQ8 264 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 POC1AQ8NBT0 407 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF671Q8TAW3 534 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 H1FXQ92522 213 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 TNFRSF14Q92956 283 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 SDSLQ96GA7 329 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 CENPNQ96H22 339 aaPredicted RBP8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 SLITRK2Q9H156 845 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 SEMA6AQ9H2E6 1030 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 SIRT7Q9NRC8 400 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 TNFRSF19Q9NS68 423 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 RASL12Q9NYN1 266 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 C1RLQ9NZP8 487 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 OR52A1Q9UKL2 312 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 GTF2A1LQ9UNN4 478 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 SNX5Q9Y5X3 404 aa8.59□□□□□ -1.03
HMGXB3-205ENST00000514469 A0A1B0GUS0 222 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 RNASEK-C17orf49H0YIS7 233 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 J3QT63 122 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 DLGAP1O14490 977 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 CIB2O75838 187 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 PGA5P0DJD9 388 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 OMGP23515 440 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 POLR2IP36954 125 aaKnown RBP8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 IER3P46695 156 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 RAG2P55895 527 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 RELBQ01201 579 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 GUCA2AQ02747 115 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 SMIM21Q3B7S5 101 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 CLVS2Q5SYC1 327 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 ASRGL1Q7L266 308 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 CATSPERDQ86XM0 798 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNRF1Q8ND25 227 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 TBC1D15Q8TC07 691 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 NPRL2Q8WTW4 380 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 DYRK2Q92630 601 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 OSBPL10Q9BXB5 764 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 RIBC2Q9H4K1 309 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 ELL3Q9HB65 397 aaPredicted RBP8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 GPR173Q9NS66 373 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNRD1Q9P1U0 126 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 SLC22A13Q9Y226 551 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms