RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MAS1P04201 325 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 CD55P08174 381 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 FSTP19883 344 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 AZGP1P25311 298 aaKnown RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 CD200P41217 278 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 TMBIM6P55061 237 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 CCL8P80075 99 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 MRPS11P82912 194 aaKnown RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 BLMHQ13867 455 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 FAM76BQ5HYJ3 339 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 C11orf71Q6IPW1 123 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 Q6ZR03 302 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 ZCCHC24Q8N2G6 241 aaKnown RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 PNLDC1Q8NA58 520 aaKnown RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 OR10AD1Q8NGE0 317 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 OR13C9Q8NGT0 318 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 OR11L1Q8NGX0 322 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 RAB2BQ8WUD1 216 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 HPS1Q92902 700 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 S100A13Q99584 98 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 BCL7BQ9BQE9 202 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 TPK1Q9H3S4 243 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 TXNL4BQ9NX01 149 aaKnown RBP8.62□□□□□ -1.03
NEDD9-214ENST00000513989 COL6A5A8TX70 2615 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 ATRQ13535 2644 aa8.62□□□□□ -1.03
NEDD9-214ENST00000513989 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 PQLC2LA1A4F0 135 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 LRP5LA4QPB2 252 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 TRIM64BA6NI03 449 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 A6NLC8 198 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 F5H5P2 479 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 H0YL77 283 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 OVOL3O00110 214 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 PIN1P1O15428 100 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MLNRO43193 412 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 IGFBP3P17936 291 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 ZNF93P35789 620 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 GATA4P43694 442 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MTNR1BP49286 362 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 EFNA4P52798 201 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 INSL4Q14641 139 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 KISS1Q15726 138 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 HFEQ30201 348 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 TMEM255AQ5JRV8 349 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 DDI2Q5TDH0 399 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 ZNF529Q6P280 563 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 PEG10Q86TG7 708 aaKnown RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 CROCCP3Q8IVE0 287 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MKXQ8IYA7 352 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 C1orf87Q8N0U7 546 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 UBASH3BQ8TF42 649 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 RDH5Q92781 318 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MBD6Q96DN6 1003 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MEGF10Q96KG7 1140 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 UQCC2Q9BRT2 126 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 MYOZ1Q9NP98 299 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 BEX4Q9NWD9 120 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-214ENST00000513989 PPP1R3CQ9UQK1 317 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 POLDIP2Q9Y2S7 368 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 RTTNQ86VV8 2226 aa8.61□□□□□ -1.03
NEDD9-214ENST00000513989 TRAV8-7A0A075B6U6 113 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 SMIM31A0A1B0GVY4 71 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 hCG_1807616A0A1W2PRN6 198 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 TMEM225BP0DP42 221 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 DAOP14920 347 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 PAX1P15863 534 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 RAB3BP20337 219 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 HAAOP46952 286 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 BMXP51813 675 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 CAPZA1P52907 286 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 ATP5J2P56134 94 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 TMEM33P57088 247 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 DSCR9P59020 149 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 MAB21L1Q13394 359 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 FAM27D1Q5T7N8 215 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 USP43Q70EL4 1123 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 JAGN1Q8N5M9 183 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 ZSCAN4Q8NAM6 433 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-214ENST00000513989 WFDC11Q8NEX6 87 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 OR52N4Q8NGI2 321 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 ZNF420Q8TAQ5 688 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-214ENST00000513989 TRMT10AQ8TBZ6 339 aaKnown RBP8.6□□□□□ -1.03
NEDD9-214ENST00000513989 NPRL2Q8WTW4 380 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 ITLN1Q8WWA0 313 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 CCL17Q92583 94 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 GTF3AQ92664 365 aaKnown RBP8.6□□□□□ -1.03
NEDD9-214ENST00000513989 SORCS2Q96PQ0 1159 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 SMR3AQ99954 134 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 CENPOQ9BU64 300 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 PKIBQ9C010 78 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 OR51I2Q9H344 312 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 BATF3Q9NR55 127 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 ZNF701Q9NV72 531 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-214ENST00000513989 CADP27708 2225 aa8.6□□□□□ -1.03
NEDD9-214ENST00000513989 HEATR1Q9H583 2144 aaKnown RBP8.59□□□□□ -1.03
NEDD9-214ENST00000513989 IGHV1-69-2A0A0G2JMI3 117 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms