RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 LMO7DNF2Z398 122 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 EIF4E2O60573 245 aaKnown RBP10.07□□□□□ -0.8
TCOF1-211ENST00000513346 CD1AP06126 327 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 KITLGP21583 273 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 MPGP29372 298 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 DDTP30046 118 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 CD200P41217 278 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 GRB2P62993 217 aaKnown RBP10.07□□□□□ -0.8
TCOF1-211ENST00000513346 HIST1H3AP68431 136 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-211ENST00000513346 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 OR4F5Q8NH21 305 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 NOL4LQ96MY1 436 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-211ENST00000513346 OR4F4Q96R69 305 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 TXNIPQ9H3M7 391 aa10.07□□□□□ -0.8
TCOF1-211ENST00000513346 ZNFX1Q9P2E3 1918 aaKnown RBP10.07□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF320A2RRD8 509 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 G3V3Q6 166 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 KLRC4-KLRK1H3BQV0 150 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 OPN1MWP04001 364 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 CISD3P0C7P0 127 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 OPN1MW2P0DN77 364 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 OPN1MW3P0DN78 364 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 ACKR3P25106 362 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 OPRM1P35372 400 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 TPPP2P59282 170 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 FAM199XQ6PEV8 388 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 C6orf15Q6UXA7 325 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 LRRC18Q8N456 261 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 ABHD5Q8WTS1 349 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 MUCL1Q96DR8 90 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF845Q96IR2 970 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 SOSTQ9BQB4 213 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PLA2G2FQ9BZM2 168 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 WWTR1Q9GZV5 400 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PBOV1Q9GZY1 135 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 KCNK15Q9H427 330 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 NPTNQ9Y639 398 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 SERPINE3A8MV23 424 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 EIF1BO60739 113 aaKnown RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 HTR5AP47898 357 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 RUNX2Q13950 521 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 DRAM2Q6UX65 266 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 CLEC18BQ6UXF7 455 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 GRINAQ7Z429 371 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 KLHDC1Q8N7A1 406 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 RCC2Q9P258 522 aaKnown RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 TP53TG5Q9Y2B4 290 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 TRPM6Q9BX84 2022 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 DNAJC13O75165 2243 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 CDRT15L2A8MXV6 281 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 CDKN2AP42771 156 aaKnown RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 CARD18P57730 90 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PHYHD1Q5SRE7 291 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 TSEN54Q7Z6J9 526 aaKnown RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 MAGT1Q9H0U3 335 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PITPNC1Q9UKF7 332 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 NOSIPQ9Y314 301 aaKnown RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 A0A1B0GV90 55 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 MVB12AQ96EY5 273 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 BSCL2Q96G97 398 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-211ENST00000513346 SNX22Q96L94 193 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 GPR84Q9NQS5 396 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 PIGLQ9Y2B2 252 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 SVILO95425 2214 aa10.06□□□□□ -0.8
TCOF1-211ENST00000513346 TRAV8-7A0A075B6U6 113 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 MED19A0JLT2 244 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 HIST1H1DP16402 221 aaKnown RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 CCKARP32238 428 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 PSMF1Q92530 271 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 RHOVQ96L33 236 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 CCDC88CQ9P219 2028 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 B4DEV8 164 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 H0YIG0 161 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 FBP1P09467 338 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 SULT1A2P50226 295 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF90Q03938 601 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 SLC25A38Q96DW6 304 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 PGLYRP3Q96LB9 341 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 HEXA-AS1Q9H8Q6 139 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 LYRM2Q9NU23 88 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 OR4C45A6NMZ5 311 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 CST7O76096 145 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 PRF1P14222 555 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 TBXA2RP21731 343 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 TNFSF4P23510 183 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 MPLP40238 635 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms