RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 OR4C12Q96R67 309 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 RSRP1Q9BUV0 290 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 GABARAPL3Q9BY60 117 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SCN4AP35499 1836 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 MYH6P13533 1939 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 A6NIN4 97 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CHEK1O14757 476 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FABP7O15540 132 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR7C2O60412 319 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PF4P02776 101 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TFAP2AP05549 437 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 NGFRP08138 427 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 RPS4XP62701 263 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 SORDQ00796 357 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF239Q16600 458 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 RPL7L1Q6DKI1 246 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 ELP2Q6IA86 826 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 GIMAP1Q8WWP7 306 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ERGIC1Q969X5 290 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ACY3Q96HD9 319 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ADGRG7Q96K78 797 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 GP6Q9HCN6 339 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PIPOXQ9P0Z9 390 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CD300AQ9UGN4 299 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 LNP1A1A4G5 178 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FITM1A5D6W6 292 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 EPOPA6NHQ4 379 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C9orf172C9J069 976 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SPINT1O43278 529 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 B3GALNT1O75752 331 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CTRB1P17538 263 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CEACAM6P40199 344 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SLC37A1P57057 533 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 UBE2KP61086 200 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 NAAAQ02083 359 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C2orf76Q3KRA6 126 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CTRB2Q6GPI1 263 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 MRM1Q6IN84 353 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 LINC00596Q86U02 117 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR10V1Q8NGI7 309 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR5A2Q8NGI9 324 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 Q8WTZ3 238 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 KCNK17Q96T54 332 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 GPA33Q99795 319 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PCGF1Q9BSM1 259 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 WDR61Q9GZS3 305 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 SLC17A5Q9NRA2 495 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PRD5 423 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 RAB19A4D1S5 217 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 A8MV72 311 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 PDCD6O75340 191 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FBXO24O75426 580 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 AKR1C3P42330 323 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CNN1P51911 297 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 CLINT1Q14677 625 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ST3GAL2Q16842 350 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PRSS41Q7RTY9 318 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TMEM217Q8N7C4 229 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FADS6Q8N9I5 356 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SUMF1Q8NBK3 374 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PAQR8Q8TEZ7 354 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ASB10Q8WXI3 467 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FCRL1Q96LA6 429 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 LRFN3Q9BTN0 628 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF320A2RRD8 509 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 B9A039 149 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 E5RGE8 158 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MT-ND4LP03901 98 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 GAPDHP04406 335 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 LIMS3P0CW19 117 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 LIMS4P0CW20 117 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 DAOP14920 347 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TNXAQ16473 311 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A45Q8N413 288 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TMEM105Q8N8V8 129 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 RPL3LQ92901 407 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF436Q9C0F3 470 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 SLA2Q9H6Q3 261 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 PSG11Q9UQ72 335 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 NSG2Q9Y328 171 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 RGPD4Q7Z3J3 1758 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TEX51A0A1B0GUA7 166 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF705FA8MVS1 300 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 SLC17A2O00624 439 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SPRY1O43609 319 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 FCGR3BO75015 233 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 APOC3P02656 99 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 C1QAP02745 245 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF705DP0CH99 300 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF705BP0CI00 300 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 PCBP3P57721 371 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 IZUMO4Q1ZYL8 232 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ADAM5Q6NVV9 412 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 DUSP18Q8NEJ0 188 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZFAND2BQ8WV99 257 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms