RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 RPA3P35244 121 aaPredicted RBP4.83□□□□□ -1.64
RFC1-214ENST00000512726 TUFMP49411 452 aaKnown RBP4.83□□□□□ -1.64
RFC1-214ENST00000512726 RAB38P57729 211 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 TRAM1Q15629 374 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 TRIP13Q15645 432 aaPredicted RBP4.83□□□□□ -1.64
RFC1-214ENST00000512726 TSPO2Q5TGU0 170 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 SLC16A13Q7RTY0 426 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 C11orf53Q8IXP5 236 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 PGAM4Q8N0Y7 254 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 SFXN5Q8TD22 340 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 OR5P2Q8WZ92 322 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 MRPL48Q96GC5 212 aaKnown RBP4.83□□□□□ -1.64
RFC1-214ENST00000512726 ARL5BQ96KC2 179 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 RILPQ96NA2 401 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 RBBP8Q99708 897 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 RSG1Q9BU20 258 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 FGF23Q9GZV9 251 aaPredicted RBP4.83□□□□□ -1.64
RFC1-214ENST00000512726 SLC38A10Q9HBR0 1119 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 ABCB9Q9NP78 766 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 ZNRD1Q9P1U0 126 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 SNX24Q9Y343 169 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 ADAMTSL3P82987 1691 aa4.83□□□□□ -1.64
RFC1-214ENST00000512726 ADAMTS9Q9P2N4 1935 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 SMLR1H3BR10 107 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 SOCS1O15524 211 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 EIF1BO60739 113 aaKnown RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 APCSP02743 223 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 PSG2P11465 335 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 CD40LGP29965 261 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 EIF1P41567 113 aaKnown RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 PRKCDQ05655 676 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 LOXL1Q08397 574 aaPredicted RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 UGT2A3Q6UWM9 527 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 BHLHA15Q7RTS1 189 aaPredicted RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 GAPTQ8N292 157 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 SPICQ8N5J4 248 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 DRAM1Q8N682 238 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 OR4K17Q8NGC6 315 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 DDI1Q8WTU0 396 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 ZNF514Q96K75 400 aaPredicted RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 METTL26Q96S19 204 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 UPF3BQ9BZI7 483 aaKnown RBP4.82□□□□□ -1.64
RFC1-214ENST00000512726 DNAJC27Q9NZQ0 273 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 ZNF222Q9UK12 451 aa4.82□□□□□ -1.64
RFC1-214ENST00000512726 BPY2O14599 106 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 CDIPTO14735 213 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 CRXO43186 299 aaPredicted RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 CCDC22O60826 627 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 SHOX2O60902 331 aaPredicted RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 SNAP29O95721 258 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 IGKV1D-16P01601 117 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 OR56A5P0C7T3 313 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 ZNF688P0C7X2 276 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 OCMP0CE72 109 aaPredicted RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 RD3LP0DJH9 198 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 ZNF823P16415 610 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 PLTPP55058 493 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 CD164Q04900 197 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 C16orf72Q14CZ0 275 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 C2orf83Q53S99 150 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 RBM48Q5RL73 367 aaKnown RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 BBS7Q8IWZ6 715 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 RIMKLAQ8IXN7 391 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 ZCCHC24Q8N2G6 241 aaKnown RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 ZNF433Q8N7K0 673 aaPredicted RBP4.81□□□□□ -1.64
RFC1-214ENST00000512726 OR4K5Q8NGD3 323 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 SHCBP1LQ9BZQ2 653 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 PARVGQ9HBI0 331 aa4.81□□□□□ -1.64
RFC1-214ENST00000512726 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
RFC1-214ENST00000512726 CDC42BPBQ9Y5S2 1711 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 ABCB11O95342 1321 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 C1orf232A0A0U1RR37 186 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 WI2-2373I1.2A0A1W2PRP0 233 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 M0QXV9 152 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 E2F6O75461 281 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 IGHV3-11P01762 117 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 GTF2H1P32780 548 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 PRSS3P35030 304 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 ZNF133P52736 654 aaPredicted RBP4.8□□□□□ -1.64
RFC1-214ENST00000512726 TAS2R31P59538 309 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 SYCNQ0VAF6 134 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 ZNF658BQ4V348 819 aaPredicted RBP4.8□□□□□ -1.64
RFC1-214ENST00000512726 GUSBP11Q6P575 273 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 NTM-AS1Q6ZSK4 140 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 BOD1L2Q8IYS8 172 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 UBA3Q8TBC4 463 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 CCDC127Q96BQ5 260 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 ZMYND19Q96E35 227 aaPredicted RBP4.8□□□□□ -1.64
RFC1-214ENST00000512726 NXF2Q9GZY0 626 aaKnown RBP4.8□□□□□ -1.64
RFC1-214ENST00000512726 DSN1Q9H410 356 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 SCML1Q9UN30 329 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 TMEM14AQ9Y6G1 99 aa4.8□□□□□ -1.64
RFC1-214ENST00000512726 TSPOAP1O95153 1857 aa4.79□□□□□ -1.64
RFC1-214ENST00000512726 IGKV6D-21A0A0A0MT36 114 aa4.79□□□□□ -1.64
RFC1-214ENST00000512726 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
RFC1-214ENST00000512726 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms