RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	RAB8B	Q92930	207 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	MCHR2	Q969V1	340 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	WDR34	Q96EX3	536 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	PPP1R16A	Q96I34	528 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	C2orf48	Q96LS8	159 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	ZNF285	Q96NJ3	590 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	UHRF2	Q96PU4	802 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	WFDC6	Q9BQY6	131 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	PDCD10	Q9BUL8	212 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	RAB11FIP5	Q9BXF6	653 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	PINK1	Q9BXM7	581 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	MRPL13	Q9BYD1	178 aa	Known RBP	3	□□□□□ -1.93
CAST-238	ENST00000512620	PLA2G12A	Q9BZM1	189 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	OR51I1	Q9H343	314 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	CWH43	Q9H720	699 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	AUNIP	Q9H7T9	357 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	NOX3	Q9HBY0	568 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	MRPS30	Q9NP92	439 aa	Known RBP	3	□□□□□ -1.93
CAST-238	ENST00000512620	CTPS2	Q9NRF8	586 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	INPP5E	Q9NRR6	644 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	RASL12	Q9NYN1	266 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	TREM2	Q9NZC2	230 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	STOX2	Q9P2F5	926 aa	Predicted RBP	3	□□□□□ -1.93
CAST-238	ENST00000512620	MYEF2	Q9P2K5	600 aa	Known RBP	3	□□□□□ -1.93
CAST-238	ENST00000512620	OPN4	Q9UHM6	478 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	CHTOP	Q9Y3Y2	248 aa	Known RBP	3	□□□□□ -1.93
CAST-238	ENST00000512620	SLC22A7	Q9Y694	548 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	SCN5A	Q14524	2016 aa		3	□□□□□ -1.93
CAST-238	ENST00000512620	LRRK1	Q38SD2	2015 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620		A0A087WUU8	490 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	FXYD6-FXYD2	A0A087WZ82	144 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ANKRD20A5P	A0PJZ0	165 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TMEM218	A2RU14	115 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	GSAP	A4D1B5	854 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	MSGN1	A6NI15	193 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ACOD1	A6NK06	481 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	RFPL4A	A6NLU0	287 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	DISC1	C4P0D8	188 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	RFPL4AL1	F8VTS6	287 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620		H3BTX0	84 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SAP18	O00422	153 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	HMGN4	O00479	90 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PHYH	O14832	338 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SLC31A2	O15432	143 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SGCE	O43556	437 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TSPAN2	O60636	221 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	B4GALT2	O60909	372 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	GATB	O75879	557 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	EPPIN	O95925	133 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	CAT	P04040	527 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	KLK1	P06870	262 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	GP1BA	P07359	652 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	IL3	P08700	152 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PATE4	P0C8F1	98 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	C1GALT1C1L	P0DN25	315 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ZNF35	P13682	527 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ATP1B2	P14415	290 aa	Predicted RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	NT5E	P21589	574 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	AGTR1	P30556	359 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	CHRNB4	P30926	498 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ACTR1B	P42025	376 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	OMP	P47874	163 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	KCNJ3	P48549	501 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	CSNK1D	P48730	415 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	RIDA	P52758	137 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PAX9	P55771	341 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	CCL23	P55773	120 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	H2BFS	P57053	126 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TAS2R41	P59536	307 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TAS2R60	P59551	318 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	KRTAP10-6	P60371	365 aa	Predicted RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PPIA	P62937	165 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	MRPS10	P82664	201 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TNFRSF17	Q02223	184 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SIGLEC14	Q08ET2	396 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	IL24	Q13007	206 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	COTL1	Q14019	142 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SERTAD2	Q14140	314 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PON3	Q15166	354 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	GUCA2B	Q16661	112 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ANKRD55	Q3KP44	614 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ACSM3	Q53FZ2	586 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PAN3	Q58A45	887 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	CLEC12A	Q5QGZ9	265 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	C10orf91	Q5T1B1	145 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	NCR3LG1	Q68D85	454 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	DMKN	Q6E0U4	476 aa	Predicted RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	OR2W3	Q7Z3T1	314 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	ERAS	Q7Z444	233 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	COMTD1	Q86VU5	262 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	HOGA1	Q86XE5	327 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	DCUN1D3	Q8IWE4	304 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SKA3	Q8IX90	412 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	SPAG16	Q8N0X2	631 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	PUSL1	Q8N0Z8	303 aa	Known RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	RELL2	Q8NC24	303 aa	Predicted RBP	2.99	□□□□□ -1.93
CAST-238	ENST00000512620	BBS1	Q8NFJ9	593 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	OR4D9	Q8NGE8	314 aa		2.99	□□□□□ -1.93
CAST-238	ENST00000512620	OR5D16	Q8NGK9	328 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms