RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 COX5AP20674 150 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 CD82P27701 267 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 TCTAP57738 103 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 SRSF5Q13243 272 aaKnown RBP9.76□□□□□ -0.85
CPNE4-209ENST00000512055 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-209ENST00000512055 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
CPNE4-209ENST00000512055 KCNG3Q8TAE7 436 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 WDR89Q96FK6 387 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-209ENST00000512055 ULBP3Q9BZM4 244 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 GNB4Q9HAV0 340 aa9.76□□□□□ -0.85
CPNE4-209ENST00000512055 AREGP15514 252 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CRISP2P16562 243 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CPEP16870 476 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 HTR1DP28221 377 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ERVS71-1P61550 626 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 DCDP81605 110 aaKnown RBP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 MIDNQ504T8 468 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FAM57BQ71RH2 274 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 OR4D11Q8NGI4 311 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 GABRG3Q99928 467 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CNTD2Q9H8S5 307 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ISG20L2Q9H9L3 353 aaKnown RBP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 LNP1A1A4G5 178 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 E5RGE8 158 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 H7C2G1 150 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FFAR1O14842 300 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CHRNA7P36544 502 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ASCL1P50553 236 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SELENBP1Q13228 472 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FZD2Q14332 565 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ELAVL1Q15717 326 aaKnown RBP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ADIPOQQ15848 244 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 TMEM176BQ3YBM2 270 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 KIRREL2Q6UWL6 708 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 TSEN54Q7Z6J9 526 aaKnown RBP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SFTPA2Q8IWL1 248 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SLC22A13Q9Y226 551 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CHST2Q9Y4C5 530 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 NPIPB8E9PQR5 432 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SEMA7AO75326 666 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 ZNF253O75346 499 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 PCMT1P22061 227 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 HMGA2P52926 109 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CBLN2Q8IUK8 224 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 EDAQ92838 391 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SLC35E1Q96K37 410 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 WFIKKN1Q96NZ8 548 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SLC25A19Q9HC21 320 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FAM60AQ9NP50 221 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 WSB1Q9Y6I7 421 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 TRAV36DV7A0A075B6V5 113 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 HRO43593 1189 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 SPNP16150 400 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FOLR3P41439 243 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 KCNJ3P48549 501 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 LSM11P83369 360 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPNE4-209ENST00000512055 HLA-BQ31612 363 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 FCRL6Q6DN72 434 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 OR2L13Q8N349 312 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 OR5AU1Q8NGC0 362 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 S1PR3Q99500 378 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 PLEKHF2Q9H8W4 249 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 AKIP1Q9NQ31 210 aa9.75□□□□□ -0.85
CPNE4-209ENST00000512055 GREB1Q4ZG55 1949 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 GEMIN2O14893 280 aaKnown RBP9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ARPC3O15145 178 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 SPINT1O43278 529 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 BCL2L11O43521 198 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 TMEM267Q0VDI3 215 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ZIC1Q15915 447 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 C12orf73Q69YU5 71 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ADGRG3Q86Y34 549 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 LINC00346Q8IVM7 164 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 C17orf78Q8N4C9 275 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 SIRT6Q8N6T7 355 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 HSD17B8Q92506 261 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 TBX15Q96SF7 602 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 C20orf141Q9NUB4 165 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 CACNA1IQ9P0X4 2223 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 LRP3O75074 770 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 CDS2O95674 445 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 GCGP01275 180 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 CAMPP49913 170 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 CNN1P51911 297 aaKnown RBP9.74□□□□□ -0.85
CPNE4-209ENST00000512055 FAAP20Q6NZ36 180 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 TMEM116Q8NCL8 245 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 OR52I2Q8NH67 350 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-209ENST00000512055 SLIRPQ9GZT3 109 aaKnown RBP9.74□□□□□ -0.85
CPNE4-209ENST00000512055 TMEM140Q9NV12 185 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 NKAIN1Q4KMZ8 207 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ABI3BPQ7Z7G0 1075 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 ANGPTL5Q86XS5 388 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 FAM3DQ96BQ1 224 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 OBP2BQ9NPH6 170 aa9.74□□□□□ -0.85
CPNE4-209ENST00000512055 TMEM210A6NLX4 147 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms