RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ETV7Q9Y603 341 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TP53BP1Q12888 1972 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FANCMQ8IYD8 2048 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CENPVL1A0A0U1RR11 272 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CENPVL3A0A0U1RRI6 287 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 MEIOCA2RUB1 952 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DHRS7CA6NNS2 312 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CDX4O14627 284 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 MPDU1O75352 247 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 UGT2B17O75795 530 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PIAS1O75925 651 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 IFNA1P01562 189 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 IGF1P05019 195 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 C8orf88P0DMB2 117 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 GABRA1P14867 456 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SRD5A1P18405 259 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 AADACP22760 399 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 HRH2P25021 359 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 F2RP25116 425 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 XCR1P46094 333 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPL21P46778 160 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLDN20P56880 219 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 KLF3P57682 345 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 GAB1Q13480 694 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 GPR50Q13585 617 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FZD2Q14332 565 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 TBC1D28Q2M2D7 210 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DEFB133Q30KQ1 61 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 STPG1Q5TH74 334 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC23A3Q6PIS1 610 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SFTPA2Q8IWL1 248 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC35F2Q8IXU6 374 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PACRGLQ8N7B6 248 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ARIH2OSQ8N7S6 290 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 THAP8Q8NA92 274 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 AQP11Q8NBQ7 271 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR13G1Q8NGZ3 307 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR56B4Q8NH76 319 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CCL4L1Q8NHW4 92 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 LMX1AQ8TE12 382 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ART4Q93070 314 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM46AQ96IP4 442 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 LOXL4Q96JB6 756 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 APOOQ9BUR5 198 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 MAP1LC3AQ9H492 121 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FGF22Q9HCT0 170 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM9BQ9NQ34 198 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FGF21Q9NSA1 209 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR1A1Q9P1Q5 309 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 POMT2Q9UKY4 750 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PCYT1BQ9Y5K3 369 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 A3GALT2U3KPV4 340 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CFAP47Q6ZTR5 3102 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 NSG1A0A0A6YYJ2 146 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPTY2D1-AS1A0A0U1RR47 76 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZAR1LA6NP61 321 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 MPTX1A8MV57 137 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 H3BTX0 84 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLPP3O14495 311 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PHF1O43189 567 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 LYPLA1O75608 230 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ATP5LO75964 103 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SOD1P00441 154 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 LIMS3P0CW19 117 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 LIMS4P0CW20 117 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CTSEP14091 401 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 AK4P27144 223 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 NSG1P42857 185 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CTSCP53634 463 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CDKN2DP55273 166 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PFN3P60673 137 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DOC2BQ14184 412 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DCAF10Q5QP82 559 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 FNBP1LQ5T0N5 605 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 HENMT1Q5T8I9 393 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF773Q6PK81 442 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRSS48Q7RTY5 328 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 TSEN54Q7Z6J9 526 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PEG10Q86TG7 708 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC34A3Q8N130 599 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 EID2Q8N6I1 236 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 BMPERQ8N8U9 685 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 RELL2Q8NC24 303 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 KBTBD8Q8NFY9 601 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR5M3Q8NGP4 307 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR5J2Q8NH18 312 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC7A13Q8TCU3 470 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 Q8WTZ3 238 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 DSN1Q9H410 356 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 CISD1Q9NZ45 108 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 IL17CQ9P0M4 197 aa4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 PURGQ9UJV8 347 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-208ENST00000511955 TDRD6O60522 2096 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 GOLGA4Q13439 2230 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZFHX4Q86UP3 3567 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms