RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LOC102725191A0A1B0GVB3 256 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 TCRBV9S1A1TA0A576 114 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 A8MVM7 634 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 SNURFLB1AK76 121 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 E7ESA3 106 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 NPFFO15130 113 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 FSTL3O95633 263 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 MBD3O95983 291 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 CCNOP22674 350 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 PAX6P26367 422 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 CAPGP40121 348 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 C1DQ13901 141 aaKnown RBP4.64□□□□□ -1.67
USP53-206ENST00000510737 PPP1R7Q15435 360 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 TBC1D28Q2M2D7 210 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 SMU1Q2TAY7 513 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 MS4A18Q3C1V0 323 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 UNC50Q53HI1 259 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 XKR7Q5GH72 579 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 SLC35D3Q5M8T2 416 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 C1orf140Q5VVS0 124 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 CAVIN1Q6NZI2 390 aaKnown RBP4.64□□□□□ -1.67
USP53-206ENST00000510737 UNQ9370/PRO34162Q6UXP9 181 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 CCDC121Q6ZUS5 278 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 CYS1Q717R9 158 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 C19orf18Q8NEA5 215 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 OR5AU1Q8NGC0 362 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 MFSD8Q8NHS3 518 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 PNPT1Q8TCS8 783 aaKnown RBP4.64□□□□□ -1.67
USP53-206ENST00000510737 CDKL2Q92772 493 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 PPCDCQ96CD2 204 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 SLC25A36Q96CQ1 311 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 OR2V2Q96R30 315 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 GPR61Q9BZJ8 451 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 ZNF350Q9GZX5 532 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 AASSQ9UDR5 926 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 BAIAP2L1Q9UHR4 511 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 GUCA1BQ9UMX6 200 aa4.64□□□□□ -1.67
USP53-206ENST00000510737 NUP214P35658 2090 aaPredicted RBP4.63□□□□□ -1.67
USP53-206ENST00000510737 LOC100509620A0A075B734 347 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 TCRBV4S1A1TA0A5B7 111 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 FAAHO00519 579 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 PTHP01270 115 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 HMOX2P30519 316 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 ARL3P36405 182 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 NPY4RP50391 375 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 METAP1DQ6UB28 335 aaPredicted RBP4.63□□□□□ -1.67
USP53-206ENST00000510737 C3orf62Q6ZUJ4 267 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 CTAGE3PQ8IX95 158 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 CLEC4FQ8N1N0 589 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 FGFRL1Q8N441 504 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 PSMA8Q8TAA3 256 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 SLC7A13Q8TCU3 470 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 ISOC1Q96CN7 298 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 TECTBQ96PL2 329 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 CDCA4Q9BXL8 241 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 ULBP2Q9BZM5 246 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 C1orf198Q9H425 327 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 ZMAT5Q9UDW3 170 aaKnown RBP4.63□□□□□ -1.67
USP53-206ENST00000510737 CCL27Q9Y4X3 112 aa4.63□□□□□ -1.67
USP53-206ENST00000510737 IGHV3-64DA0A0J9YX35 117 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 IQCMA0A1B0GVH7 501 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TIMM8AO60220 97 aaPredicted RBP4.62□□□□□ -1.67
USP53-206ENST00000510737 OR10H3O60404 316 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 SMIM24O75264 130 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 PAHP00439 452 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 THY1P04216 161 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 GUSBP08236 651 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 KRT16P08779 473 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 MMP7P09237 267 aaPredicted RBP4.62□□□□□ -1.67
USP53-206ENST00000510737 RBP1P09455 135 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 LAMP1P11279 417 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 AHCYP23526 432 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 STOMP27105 288 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 SAA4P35542 130 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 RPS5P46782 204 aaKnown RBP4.62□□□□□ -1.67
USP53-206ENST00000510737 MFAP4P55083 255 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 PPP1CBP62140 327 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 BLCAPP62952 87 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 C2orf54Q08AI8 447 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 EPS8Q12929 822 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 KLRD1Q13241 179 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 UGT3A2Q3SY77 523 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 IL23RQ5VWK5 629 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TMEM53Q6P2H8 277 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 RFPL4BQ6ZWI9 263 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 C6orf120Q7Z4R8 191 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 OR6N1Q8NGY5 312 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 OR5AK3PQ8NH89 298 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 CLHC1Q8NHS4 586 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 OR5P2Q8WZ92 322 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TNFRSF14Q92956 283 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 MYDGFQ969H8 173 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TSSK3Q96PN8 268 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 ZNF382Q96SR6 550 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 SIRT7Q9NRC8 400 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TMEM38BQ9NVV0 291 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 ERVK-18Q9QC07 812 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 EIF3KQ9UBQ5 218 aaKnown RBP4.62□□□□□ -1.67
USP53-206ENST00000510737 TMCC3Q9ULS5 477 aa4.62□□□□□ -1.67
USP53-206ENST00000510737 TMCO1Q9UM00 188 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms