RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 SOX7Q9BT81 388 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 LPAR6P43657 344 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 EFNA3P52797 238 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
USP38-202ENST00000510377 FHL1Q13642 323 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 TGIF2Q9GZN2 237 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 MTCH2Q9Y6C9 303 aa13.19□□□□□ -0.3
USP38-202ENST00000510377 A0A1W2PPE2 198 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 C7orf77A4D0Y5 90 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 GPR37O15354 613 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 SPINK2P20155 84 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 MCEMP1Q8IX19 187 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 NMES1Q9C002 83 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 OR5H15A6NDH6 313 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 ONECUT2O95948 504 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 S100A8P05109 93 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 SERPINE2P07093 398 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 HOXC4P09017 264 aaPredicted RBP13.18□□□□□ -0.3
USP38-202ENST00000510377 ANKRD55Q3KP44 614 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 OR10G3Q8NGC4 313 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 CPNE4Q96A23 557 aaPredicted RBP13.18□□□□□ -0.3
USP38-202ENST00000510377 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 SRPK3Q9UPE1 567 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 SSSCA1O60232 199 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 CD8AP01732 235 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 GRB2P62993 217 aaKnown RBP13.18□□□□□ -0.3
USP38-202ENST00000510377 TLE1Q04724 770 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 ARHGEF39Q8N4T4 335 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 DENND4CQ5VZ89 1909 aa13.18□□□□□ -0.3
USP38-202ENST00000510377 E5RGE8 158 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 MSR1P21757 451 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 MST1P26927 711 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 RPL23AP62750 156 aaKnown RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 ROM1Q03395 351 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 CLEC12BQ2HXU8 276 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 ZNF684Q5T5D7 378 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 LILRB2Q8N423 598 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 DYRK2Q92630 601 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 NSG2Q9Y328 171 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 ABCA7Q8IZY2 2146 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 ZNF705GA8MUZ8 300 aaPredicted RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 CNN3Q15417 329 aaKnown RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 HIST2H3PS2Q5TEC6 136 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 SHEQ5VZ18 495 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 FAHD2BQ6P2I3 314 aaPredicted RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 BHLHE23Q8NDY6 225 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 RNF133Q8WVZ7 376 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 RRNAD1Q96FB5 475 aaKnown RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 FAHD2AQ96GK7 314 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 PAPOLGQ9BWT3 736 aaKnown RBP13.17□□□□□ -0.3
USP38-202ENST00000510377 ADAM19Q9H013 955 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 LPAR5Q9H1C0 372 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 C19orf12Q9NSK7 152 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 MIOXQ9UGB7 285 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 IGKV1D-43A0A0B4J1Z2 117 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 A6NCN8 305 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 MSTNO14793 375 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 SLC34A2O95436 690 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 H2AFB1P0C5Y9 115 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 OR5AC1P0C628 307 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 MMP16P51512 607 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 RAB11AP62491 216 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 UNC119Q13432 240 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 RTN4RL2Q86UN3 420 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
USP38-202ENST00000510377 TK1P04183 234 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 S100A12P80511 92 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 C9orf152Q5JTZ5 239 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 AQP3Q92482 292 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 RCL1Q9Y2P8 373 aaKnown RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 PTRH2Q9Y3E5 179 aaKnown RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 HSD17B6O14756 317 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 DXOO77932 396 aaKnown RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 ZNF845Q96IR2 970 aaPredicted RBP13.16□□□□□ -0.3
USP38-202ENST00000510377 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 MOB1AQ9H8S9 216 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 FAM86C1Q9NVL1 165 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 DUSP1P28562 367 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 SLC35A1P78382 337 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 HFEQ30201 348 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms