RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 AJUBAQ96IF1 538 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 GAFA1Q96PS6 74 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 NKX3-1Q99801 234 aaPredicted RBP8.47□□□□□ -1.05
DDX41-211ENST00000510171 OR10A2Q9H208 303 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 ABCB9Q9NP78 766 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 NLKQ9UBE8 527 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 MPC1Q9Y5U8 109 aa8.47□□□□□ -1.05
DDX41-211ENST00000510171 OR2AT4A6NND4 320 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 ZNF850A8MQ14 1090 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PRR23D1E9PI22 279 aaPredicted RBP8.46□□□□□ -1.06
DDX41-211ENST00000510171 FBXO24O75426 580 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 CST4P01036 141 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 H2BFMP0C1H6 154 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PRR23D2P0DMB1 279 aaPredicted RBP8.46□□□□□ -1.06
DDX41-211ENST00000510171 OSMP13725 252 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 ANXA8P13928 327 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PAX6P26367 422 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 OPRL1P41146 370 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 GABRA2P47869 451 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PRDX4Q13162 271 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 GINS1Q14691 196 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 GFOD2Q3B7J2 385 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 FAM76BQ5HYJ3 339 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 TRPM8Q7Z2W7 1104 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.46□□□□□ -1.06
DDX41-211ENST00000510171 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 FAM185AQ8N0U4 392 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 OR4F17Q8NGA8 305 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 OTOSQ8NHW6 89 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 DNAJC9Q8WXX5 260 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 R3HDM4Q96D70 268 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 PGAM5Q96HS1 289 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 RNF170Q96K19 258 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 HIST1H2AAQ96QV6 131 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 OR4F4Q96R69 305 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 MMP28Q9H239 520 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 NIPAL2Q9H841 368 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 HEXA-AS1Q9H8Q6 139 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 MED20Q9H944 212 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.46□□□□□ -1.06
DDX41-211ENST00000510171 AURKAIP1Q9NWT8 199 aaPredicted RBP8.46□□□□□ -1.06
DDX41-211ENST00000510171 DNAJC27Q9NZQ0 273 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 ZNF319Q9P2F9 582 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 DNAJB9Q9UBS3 223 aa8.46□□□□□ -1.06
DDX41-211ENST00000510171 TRBV23-1A0A0A0MS06 115 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 LYNP07948 512 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 CD28P10747 220 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 GLRA1P23415 457 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 BMXP51813 675 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 LGALS4P56470 323 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 SLC35D3Q5M8T2 416 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 TMEM179BQ7Z7N9 219 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 MKXQ8IYA7 352 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 ZNRF1Q8ND25 227 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 PAPD5Q8NDF8 572 aaKnown RBP8.45□□□□□ -1.06
DDX41-211ENST00000510171 TMEM185AQ8NFB2 350 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 PIGCQ92535 297 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 ITFG2Q969R8 447 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 PHF21AQ96BD5 680 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 OR51V1Q9H2C8 321 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 ELL3Q9HB65 397 aaPredicted RBP8.45□□□□□ -1.06
DDX41-211ENST00000510171 CMYA5Q8N3K9 4069 aa8.45□□□□□ -1.06
DDX41-211ENST00000510171 IGKV1D-17A0A075B6S4 117 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 A0A1W2PPH5 198 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CHST1O43916 411 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 FKBP6O75344 327 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 PSG2P11465 335 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 ACKR3P25106 362 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 DCTDP32321 178 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CAPZA1P52907 286 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CBX1P83916 185 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CDK5Q00535 292 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 HABP2Q14520 560 aaPredicted RBP8.44□□□□□ -1.06
DDX41-211ENST00000510171 FOXB2Q5VYV0 432 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CPOQ8IVL8 374 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 ZDHHC23Q8IYP9 409 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 Q8N2B8 174 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 BCAS4Q8TDM0 211 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 THEM6Q8WUY1 208 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 NRBF2Q96F24 287 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 AMELYQ99218 206 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 CITED2Q99967 270 aaPredicted RBP8.44□□□□□ -1.06
DDX41-211ENST00000510171 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 SLC25A19Q9HC21 320 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 C19orf12Q9NSK7 152 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 SERTAD4Q9NUC0 356 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 POMPQ9Y244 141 aa8.44□□□□□ -1.06
DDX41-211ENST00000510171 hCG_1809904A0A1W2PP81 198 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 A0A1W2PPE2 198 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 A0A1W2PR64 198 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 A0A1W2PRV1 198 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 TCRBV3S1A0A5B6 114 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 MEGF11A6BM72 1044 aa8.43□□□□□ -1.06
DDX41-211ENST00000510171 ACOD1A6NK06 481 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms