RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ZFP36L1Q07352 338 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 C6orf201Q7Z4U5 140 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 DTX1Q86Y01 620 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 OR1S2Q8NGQ3 325 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 SPSB1Q96BD6 273 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF775Q96BV0 537 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF837Q96EG3 531 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 RRNAD1Q96FB5 475 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 LRRC46Q96FV0 321 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 METTL9Q9H1A3 318 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 MEMO1Q9Y316 297 aa15.68■□□□□ 0.1
CCHCR1-228ENST00000509552 FGF16O43320 207 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 KNG1P01042 644 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 CSTBP04080 98 aaKnown RBP15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 NKAPLQ5M9Q1 402 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 GPR137CQ8N3F9 429 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 RNF141Q8WVD5 230 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 MPTX1A8MV57 137 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 P04436 131 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 SRD5A2P31213 254 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 OR14L1PQ8NHC6 308 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 KCNE4Q8WWG9 221 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 OR10C1Q96KK4 312 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 Q96M66 194 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 MICU1Q9BPX6 476 aa15.67■□□□□ 0.1
CCHCR1-228ENST00000509552 NUPL2O15504 423 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 IFNA2P01563 188 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CST2P09228 141 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 RPS2P15880 293 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CRYGSP22914 178 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 RBMXP38159 391 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CARD18P57730 90 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 SCRN3Q0VDG4 424 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CHAF1BQ13112 559 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 RSU1Q15404 277 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CNN3Q15417 329 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF468Q5VIY5 522 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 PLXDC2Q6UX71 529 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 SULF2Q8IWU5 870 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 BOLLQ8N9W6 283 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 MAFAQ8NHW3 353 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 REEP6Q96HR9 211 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CYTL1Q9NRR1 136 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 C1orf123Q9NWV4 160 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 SLC39A1Q9NY26 324 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 OR5AC2Q9NZP5 309 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 MCTS1Q9ULC4 181 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 EDARQ9UNE0 448 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 RRP8O43159 456 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 IGHEP01854 428 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 HOXB5P09067 269 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 RSPO4Q2I0M5 234 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF585AQ6P3V2 769 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 ATRAIDQ6UW56 229 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 YRDCQ86U90 279 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 POC1AQ8NBT0 407 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 OR2AE1Q8NHA4 323 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 OR1F12Q8NHA8 337 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 AQP10Q96PS8 301 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF2Q9BSG1 426 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 SLC6A15Q9H2J7 730 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 CRLF2Q9HC73 371 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 GSKIPQ9P0R6 139 aa15.66■□□□□ 0.1
CCHCR1-228ENST00000509552 TNRC6BQ9UPQ9 1833 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 FAM230AA0A1W2PPH8 454 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 SYNGR3O43761 229 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 RAB32Q13637 225 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 DNAJB11Q9UBS4 358 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 MASP2O00187 686 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 CDK2AP1O14519 115 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 CER1O95813 267 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 LCATP04180 440 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 ACKR3P25106 362 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 B3GALT5-AS1P59052 145 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 S100A10P60903 97 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 CCDC157Q569K6 752 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 ZNF774Q6NX45 483 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 RPUSD3Q6P087 351 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 SGPP2Q8IWX5 399 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 CPT1CQ8TCG5 803 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 PRO3102Q9H379 93 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 RYDENQ9NUL5 291 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 TMEM100Q9NV29 134 aa15.65■□□□□ 0.1
CCHCR1-228ENST00000509552 CCDC187A0A096LP49 1063 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 MSGN1A6NI15 193 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 TRIM77I1YAP6 450 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 SFTPBP07988 381 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 AAED1Q7RTV5 226 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 TMED6Q8WW62 240 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 ARL11Q969Q4 196 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 TMEM38BQ9NVV0 291 aa15.64■□□□□ 0.09
CCHCR1-228ENST00000509552 IGKV1D-8A0A087WSZ0 117 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 NUDT19A8MXV4 375 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 PATE3B3GLJ2 98 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 SIGLEC5O15389 551 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 ICAM2P13598 275 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 PTGER4P35408 488 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 EIF5AP63241 154 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 SIGLEC14Q08ET2 396 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 BHLHE23Q8NDY6 225 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms