RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RHOBP62745 196 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 FKBP1BP68106 108 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 RUNX1Q01196 453 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OC90Q02509 493 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 GNA12Q03113 381 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 CAV1Q03135 178 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 PLCXD2Q0VAA5 305 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OR5I1Q13606 314 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 TRMT5Q32P41 509 aaKnown RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 MESTQ5EB52 335 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 SOHLH1Q5JUK2 328 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 C6orf141Q5SZD1 244 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 FAM166AQ6J272 317 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 PAQR6Q6TCH4 344 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 LCTLQ6UWM7 567 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 Q6ZT83 130 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 RASSF6Q6ZTQ3 369 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ACOT1Q86TX2 421 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 SLC22A15Q8IZD6 547 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OR9I1Q8NGQ6 314 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OR13C8Q8NGS7 320 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OR8D1Q8WZ84 308 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 NUS1Q96E22 293 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ZC3HAV1LQ96H79 300 aaKnown RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ADGRG7Q96K78 797 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 HYLS1Q96M11 299 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 GPR82Q96P67 336 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 DEFB118Q96PH6 123 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 GFM1Q96RP9 751 aaKnown RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 TP53RKQ96S44 253 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 GINS3Q9BRX5 216 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 FAAP24Q9BTP7 215 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF436Q9C0F3 470 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ACTR3CQ9C0K3 210 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ABCG5Q9H222 651 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 SCN3BQ9NY72 215 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 OPTCQ9UBM4 332 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 RAB22AQ9UL26 194 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 KCNS2Q9ULS6 477 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ETV7Q9Y603 341 aa3.89□□□□□ -1.79
NIPBL-206ENST00000509429 ROBO1Q9Y6N7 1651 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MYH8P13535 1937 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 A0A087WWV3 80 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 A0A087WXM4 84 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 A0A0G2JN53 185 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 A0A1B0GU03 582 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 A0A1W2PPK0 400 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 LRP5LA4QPB2 252 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MAP1LC3B2A6NCE7 125 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF726A6NNF4 738 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 E5RGE8 158 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR7A17O14581 309 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CHEK1O14757 476 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 LDB3O75112 727 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ALOX12BO75342 701 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RDH16O75452 317 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR7C1O76099 320 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 DIRAS1O95057 198 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 EML2O95834 649 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MT-CO3P00414 261 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 AMBPP02760 352 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 P04436 131 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 APODP05090 189 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FABP3P05413 133 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HPNP05981 417 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 UCHL1P09936 223 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SP9P0CG40 484 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 UBBP0CG47 229 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 EPCAMP16422 314 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RCC1P18754 421 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 TAC1P20366 129 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FASP25445 335 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 NTSP30990 170 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MDH2P40926 338 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 TNFSF9P41273 254 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CDKN2BP42772 138 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 P2RY1P47900 373 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CX3CR1P49238 355 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CLDN6P56747 220 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RIPPLY3P57055 190 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CLDN2P57739 230 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 LILRA4P59901 499 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SNRPD1P62314 119 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RPL8P62917 257 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SLC35B1P78383 322 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RHOGP84095 191 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CDK3Q00526 305 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CDK6Q00534 326 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PSG4Q00888 419 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 EWSR1Q01844 656 aaKnown RBP eCLIP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 BCL2L1Q07817 233 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CRYZQ08257 329 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms