RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 Q8N7P7 452 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 OR51G2Q8NGK0 314 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 TBX5Q99593 518 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
RAB28-205ENST00000508274 NLKQ9UBE8 527 aa11.75□□□□□ -0.53
RAB28-205ENST00000508274 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
RAB28-205ENST00000508274 MRM2Q9UI43 246 aaKnown RBP11.75□□□□□ -0.53
RAB28-205ENST00000508274 IGKV1D-17A0A075B6S4 117 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 OR2AT4A6NND4 320 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 DHRS3O75911 302 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 ATP6V1B1P15313 513 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 GABRA2P47869 451 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 RELBQ01201 579 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 HAGHLQ6PII5 290 aaPredicted RBP11.74□□□□□ -0.53
RAB28-205ENST00000508274 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 ZNRF1Q8ND25 227 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 AQP3Q92482 292 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 DUS3LQ96G46 650 aaKnown RBP11.74□□□□□ -0.53
RAB28-205ENST00000508274 ZNF488Q96MN9 340 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 CLN6Q9NWW5 311 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 ENPP5Q9UJA9 477 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 OAZ3Q9UMX2 235 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 R4GMQ9 66 aa11.74□□□□□ -0.53
RAB28-205ENST00000508274 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 A6NIN4 97 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 OR5B21A6NL26 309 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 SIGLEC5O15389 551 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 NRASP01111 189 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 ACAA1P09110 424 aaPredicted RBP11.73□□□□□ -0.53
RAB28-205ENST00000508274 PSG2P11465 335 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 GPR173Q9NS66 373 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 ZNF222Q9UK12 451 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 OR52A1Q9UKL2 312 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 SLC22A13Q9Y226 551 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 MAB21L2Q9Y586 359 aa11.73□□□□□ -0.53
RAB28-205ENST00000508274 A0A1B0GTI1 187 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 ZNF670-ZNF695F2Z2N8 137 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 H3BSH0 61 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 GPR37O15354 613 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 SYNGR1O43759 233 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 ATP5HO75947 161 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 RPP14O95059 124 aaKnown RBP11.72□□□□□ -0.53
RAB28-205ENST00000508274 IGHV4-59P01825 116 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 FCGR1AP12314 374 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 NDUFB7P17568 137 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 SRSF4Q08170 494 aaKnown RBP11.72□□□□□ -0.53
RAB28-205ENST00000508274 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 ZBTB37Q5TC79 503 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 GID4Q8IVV7 300 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 ELMOD2Q8IZ81 293 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 BATF2Q8N1L9 274 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 PNKDQ8N490 385 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 TMEM86BQ8N661 226 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 SSMEM1Q8WWF3 244 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 MED30Q96HR3 178 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 MNTQ99583 582 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 C1RLQ9NZP8 487 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 V9GYS6 101 aa11.72□□□□□ -0.53
RAB28-205ENST00000508274 SAC3D1A6NKF1 404 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
RAB28-205ENST00000508274 HAAOP46952 286 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 RAG2P55895 527 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 CAV3P56539 151 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 EGR3Q06889 387 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 ODF4Q2M2E3 257 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
RAB28-205ENST00000508274 CMTM4Q8IZR5 234 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 TMEM185AQ8NFB2 350 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 ZNF671Q8TAW3 534 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 GABARAPL3Q9BY60 117 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
RAB28-205ENST00000508274 A0A1W2PQ09 198 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 A0A1W2PQL4 384 aaPredicted RBP11.71□□□□□ -0.54
RAB28-205ENST00000508274 POM121CA8CG34 1229 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 CRYBA1P05813 215 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 HTR1FP30939 366 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 IER3P46695 156 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.54
RAB28-205ENST00000508274 CLVS2Q5SYC1 327 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 ACP7Q6ZNF0 438 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
RAB28-205ENST00000508274 YIPF7Q8N8F6 280 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms