RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 UBQLN3Q9H347 655 aa6.19□□□□□ -1.42
CLCN3-206ENST00000507875 CISD1Q9NZ45 108 aaKnown RBP6.19□□□□□ -1.42
CLCN3-206ENST00000507875 UBQLN2Q9UHD9 624 aa6.19□□□□□ -1.42
CLCN3-206ENST00000507875 TRAPPC4Q9Y296 219 aa6.19□□□□□ -1.42
CLCN3-206ENST00000507875 UGT2A1Q9Y4X1 527 aa6.19□□□□□ -1.42
CLCN3-206ENST00000507875 ISPDA4D126 451 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR5H15A6NDH6 313 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 H0YIZ8 118 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SLC2A10O95528 541 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TXNDC12O95881 172 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 IGHMP01871 453 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 BGLAPP02818 100 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SAGP10523 405 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 MAKP20794 623 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 HTR1FP30939 366 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 RORCP51449 518 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 FXYD6P3P58550 94 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TPBGQ13641 420 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 NDUFAF6Q330K2 333 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 C1orf140Q5VVS0 124 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 HACD4Q5VWC8 232 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SMIM15Q7Z3B0 74 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 HDDC2Q7Z4H3 204 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 WDSUB1Q8N9V3 476 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TMEM178AQ8NBL3 297 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 MDS2Q8NDY4 140 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR52N4Q8NGI2 321 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR4D10Q8NGI6 311 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TM9SF4Q92544 642 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SCMH1Q96GD3 660 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 FOXN4Q96NZ1 517 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CHRDL1Q9BU40 450 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ALG12Q9BV10 488 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ALX4Q9H161 411 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PROK2Q9HC23 129 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ZC4H2Q9NQZ6 224 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 NANSQ9NR45 359 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 LAMA5O15230 3695 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 NBEAQ8NFP9 2946 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PNMA8CA0A1B0GUJ8 204 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 LOC102725191A0A1B0GVB3 256 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TMEM72A0PK05 275 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 C9orf118A6NHY6 69 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 K7ENP7 123 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 BHLHE40O14503 412 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PRAF2O60831 178 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 GLCEO94923 617 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PMS2P2O95744 297 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CCL3P10147 92 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SOX2P48431 317 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CNN1P51911 297 aaKnown RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ARL6IP1Q15041 203 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 C16orf47Q6ZP98 133 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 C19orf35Q6ZS72 473 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 SHFQ7M4L6 423 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CCDC190Q86UF4 302 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 LHFPL3Q86UP9 236 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 LRRC18Q8N456 261 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 FAM98AQ8NCA5 519 aaKnown RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ZNF485Q8NCK3 441 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR4F15Q8NGB8 312 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR5J2Q8NH18 312 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 UFD1Q92890 307 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 MRPL48Q96GC5 212 aaKnown RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 BARHL1Q9BZE3 327 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PKIBQ9C010 78 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 NARFLQ9H6Q4 476 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 ZFP64Q9NPA5 681 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CMC2Q9NRP2 79 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 TXNL4BQ9NX01 149 aaKnown RBP6.18□□□□□ -1.42
CLCN3-206ENST00000507875 OR6C3Q9NZP0 311 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 MED11Q9P086 117 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 PCNX3Q9H6A9 2034 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 CELSR3Q9NYQ7 3312 aa6.18□□□□□ -1.42
CLCN3-206ENST00000507875 IGHA1P01876 353 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 HPNP05981 417 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 DPP4P27487 766 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 ERVS71-1P61550 626 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 EGR4Q05215 589 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 TNK1Q13470 666 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 TEX30Q5JUR7 227 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 SLC35D3Q5M8T2 416 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 IGFL3Q6UXB1 125 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 SLC22A16Q86VW1 577 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 MAFIPQ8WZ33 124 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 TMEM203Q969S6 136 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 SLC25A46Q96AG3 418 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 GRAMD2BQ96HH9 432 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 ZNF649Q9BS31 505 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 DKKL1Q9UK85 242 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-206ENST00000507875 ITPR1Q14643 2758 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 MPDZO75970 2070 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-206ENST00000507875 A0A1W2PNV4 684 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 FAM183AA6NL82 134 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 RIIAD1A6NNX1 92 aa6.17□□□□□ -1.42
CLCN3-206ENST00000507875 LOC110117498-PIK3R3F6TDL0 507 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms