RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CD177Q8N6Q3 437 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 ZNF676Q8N7Q3 588 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 TRMT10AQ8TBZ6 339 aaKnown RBP5.58□□□□□ -1.52
VCAN-207ENST00000507162 SLC26A7Q8TE54 656 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 DLX4Q92988 240 aaPredicted RBP5.58□□□□□ -1.52
VCAN-207ENST00000507162 BPIFA2Q96DR5 249 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RNF170Q96K19 258 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 OR4C12Q96R67 309 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RTL8AQ9BWD3 113 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 PAPOLGQ9BWT3 736 aaKnown RBP5.58□□□□□ -1.52
VCAN-207ENST00000507162 PAIP1Q9H074 479 aaKnown RBP5.58□□□□□ -1.52
VCAN-207ENST00000507162 NUAK2Q9H093 628 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 TLNRD1Q9H1K6 362 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RIMS3Q9UJD0 308 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 ZNF222Q9UK12 451 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 PYCARDQ9ULZ3 195 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 HHLA2Q9UM44 414 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RHBDD3Q9Y3P4 386 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 DNAH11Q96DT5 4516 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 HSPG2P98160 4391 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ANXA2P2A6NMY6 339 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 SOCS2O14508 198 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 AHCYL1O43865 530 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 SPAG7O75391 227 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ELANEP08246 267 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ZNF823P16415 610 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 OR1E2P47887 323 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 RPL14P50914 215 aaKnown RBP5.57□□□□□ -1.52
VCAN-207ENST00000507162 EDDM3BP56851 147 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 FOXE3Q13461 319 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 PIN1Q13526 163 aaPredicted RBP5.57□□□□□ -1.52
VCAN-207ENST00000507162 HES1Q14469 280 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ASPHD1Q5U4P2 390 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 FAM53AQ6NSI3 398 aaPredicted RBP5.57□□□□□ -1.52
VCAN-207ENST00000507162 LINC00336Q6ZUF6 198 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 TRMT10CQ7L0Y3 403 aaKnown RBP5.57□□□□□ -1.52
VCAN-207ENST00000507162 CATSPERDQ86XM0 798 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 FAM71E2Q8N5Q1 922 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ARPC1AQ92747 370 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 GTF2H4Q92759 462 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 RHOVQ96L33 236 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 ZNF570Q96NI8 536 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 TSSK2Q96PF2 358 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 CLEC7AQ9BXN2 247 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.57□□□□□ -1.52
VCAN-207ENST00000507162 A4GNTQ9UNA3 340 aa5.57□□□□□ -1.52
VCAN-207ENST00000507162 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 ZNF850A8MQ14 1090 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 LEUTXA8MZ59 168 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 HSPA12AO43301 675 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 DNAJC8O75937 253 aaPredicted RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 SERPINA1P01009 418 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 IGHG2P01859 326 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 HLA-DQA2P01906 255 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 CD14P08571 375 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 MNDAP41218 407 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 POLR2JP52435 117 aaKnown RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 SLURP1P55000 103 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 GNB1P62873 340 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 FAM3AP98173 230 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 KRR1Q13601 381 aaKnown RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 RBMY1FQ15415 496 aaKnown RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 TAF13Q15543 124 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 GFOD2Q3B7J2 385 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 OGFOD2Q6N063 350 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 SLC18B1Q6NT16 456 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 PGM2L1Q6PCE3 622 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 CCDC80Q76M96 950 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 SLC16A9Q7RTY1 509 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 ABHD12Q8N2K0 398 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 ZNF561Q8N587 486 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 C5orf56Q8N8D9 126 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 MAPKAPK5-AS1Q8N8E1 139 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 OR4P4Q8NGL7 312 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 OR13C2Q8NGS9 318 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 ZNF671Q8TAW3 534 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 PIGCQ92535 297 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 GON7Q9BXV9 100 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 NMNAT1Q9HAN9 279 aaPredicted RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 GNB4Q9HAV0 340 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 PNRC2Q9NPJ4 139 aaKnown RBP5.56□□□□□ -1.52
VCAN-207ENST00000507162 SLC25A37Q9NYZ2 338 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 SIGLEC8Q9NYZ4 499 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 ACTR3BQ9P1U1 418 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 OR14J1Q9UGF5 321 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 SH3GLB1Q9Y371 365 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 CEPT1Q9Y6K0 416 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 SESN1Q9Y6P5 492 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
VCAN-207ENST00000507162 FAM172BPA6NC97 362 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ARRDC5A6NEK1 342 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM210A6NLX4 147 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 EFCAB9A8MZ26 197 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 EVPLLA8MZ36 301 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 PSMD9O00233 223 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 DCTN6O00399 190 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 XRCC3O43542 346 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 XRCC2O43543 280 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 MTRF1O75570 445 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms