RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CSPG4P5Q96PW8 444 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 WDR54Q9H977 334 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 IGHV5-51A0A0C4DH38 117 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 A0A0J9YYE9 177 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 CTAGE15A4D2H0 777 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 SIGLEC16A6NMB1 481 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 C11orf94C9JXX5 98 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 F6UB75 175 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 DLGAP1O14490 977 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 SS18L1O75177 396 aaPredicted RBP3.81□□□□□ -1.8
HERC4-213ENST00000506515 CLIC3O95833 236 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 TRBC1P01850 177 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 TPM2P07951 284 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ZNF43P17038 809 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 CXCL5P42830 114 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 SPINT3P49223 89 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 NCBP2P52298 156 aaKnown RBP eCLIP3.81□□□□□ -1.8
HERC4-213ENST00000506515 GFERP55789 205 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ACTA2P62736 377 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ACTG2P63267 376 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ACTC1P68032 377 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ACTA1P68133 377 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 XRCC4Q13426 336 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 RSPO1Q2MKA7 263 aaPredicted RBP3.81□□□□□ -1.8
HERC4-213ENST00000506515 PTPN20Q4JDL3 420 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 PRAMEF20Q5VT98 475 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 FAM173BQ6P4H8 233 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 SASS6Q6UVJ0 657 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 Q6ZVH6 145 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 CTAGE6Q86UF2 777 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 FAM71AQ8IYT1 594 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ENTHD1Q8IYW4 607 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 TRAM1L1Q8N609 369 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 DUSP18Q8NEJ0 188 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 RAB3IL1Q8TBN0 382 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 MARCH1Q8TCQ1 289 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 ACTRT1Q8TDG2 376 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 FAM172AQ8WUF8 416 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 RXFP2Q8WXD0 754 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 LRRC58Q96CX6 371 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 CCDC126Q96EE4 140 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 LYSMD1Q96S90 227 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 SDHCQ99643 169 aaPredicted RBP3.81□□□□□ -1.8
HERC4-213ENST00000506515 ATP5SQ99766 215 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 LRRC19Q9H756 370 aa3.81□□□□□ -1.8
HERC4-213ENST00000506515 RPF2Q9H7B2 306 aaKnown RBP3.81□□□□□ -1.8
HERC4-213ENST00000506515 SPTBP11277 2137 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 ANKRD36A6QL64 1941 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 C2orf74A8MZ97 194 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 DFFAO00273 331 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
HERC4-213ENST00000506515 SLC19A2O60779 497 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 KLF7O75840 302 aaPredicted RBP3.8□□□□□ -1.8
HERC4-213ENST00000506515 OR2B3O76000 313 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 IGLV2-23P01705 113 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 ANXA5P08758 320 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 RALBP11234 206 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 ZNF24P17028 368 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 SERPINB5P36952 375 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 RFX3P48380 749 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 STC1P52823 247 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 XKR7Q5GH72 579 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 CCDC122Q5T0U0 273 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 LRRC66Q68CR7 880 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 LIX1Q8N485 282 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 MREGQ8N565 214 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 Q8N9L7 120 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 DNAAF3Q8N9W5 541 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 GIMAP1Q8WWP7 306 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 SRSF12Q8WXF0 261 aaKnown RBP3.8□□□□□ -1.8
HERC4-213ENST00000506515 ANP32EQ9BTT0 268 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 TRABDQ9H4I3 376 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 VPS37BQ9H9H4 285 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 DNAJC12Q9UKB3 198 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 SNX10Q9Y5X0 201 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 JMJD1CQ15652 2540 aa3.8□□□□□ -1.8
HERC4-213ENST00000506515 FN1P02751 2386 aaKnown RBP3.8□□□□□ -1.8
HERC4-213ENST00000506515 INTS1Q8N201 2190 aaKnown RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 DOCK10Q96BY6 2186 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 A0A0B4J2A0 478 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 C1orf232A0A0U1RR37 186 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 SMCO3A2RU48 225 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 MGAT4DA6NG13 374 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 RAB29O14966 203 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 CD5LO43866 347 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 BGLAPP02818 100 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 PABPC4LP0CB38 370 aaKnown RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 NSG1P42857 185 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 CD151P48509 253 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 NDUFA8P51970 172 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 HMGCS1Q01581 520 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 TTLL9Q3SXZ7 439 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 NKAIN1Q4KMZ8 207 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 HENMT1Q5T8I9 393 aaKnown RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 AGBL2Q5U5Z8 902 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 ANKRD26P1Q6NSI1 321 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 Q6P435 159 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms