RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ACAA1P09110 424 aaPredicted RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 IDO1P14902 403 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GPX2P18283 190 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 AZGP1P25311 298 aaKnown RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 POU1F1P28069 291 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 SLC6A1P30531 599 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 ENTPD1P49961 510 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 SLC25A1P53007 311 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GMFBP60983 142 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 SPIBQ01892 262 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 TRAP1Q12931 704 aaKnown RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 SELPLGQ14242 412 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 TBCEQ15813 527 aaPredicted RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 SSX2Q16385 188 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 ZNF674Q2M3X9 581 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 SNAI3Q3KNW1 292 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 ZNF626Q68DY1 528 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 ZNF782Q6ZMW2 699 aaPredicted RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 DPY19L4Q7Z388 723 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GLB1L2Q8IW92 636 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 MICU2Q8IYU8 434 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 OSR2Q8N2R0 312 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GJC3Q8NFK1 279 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GATAD1Q8WUU5 269 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 TAMM41Q96BW9 452 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 MALSU1Q96EH3 234 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 MED30Q96HR3 178 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 SYT4Q9H2B2 425 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 ZNF222Q9UK12 451 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 POLR1DQ9Y2S0 133 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 IGKV1D-17A0A075B6S4 117 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 IGLV1-36A0A0B4J1U3 117 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 GGT3PA6NGU5 568 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 F5H5K5 113 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 BHLHE40O14503 412 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 SLC16A7O60669 478 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 KHDRBS3O75525 346 aaKnown RBP5.49□□□□□ -1.53
VCAN-206ENST00000505615 OR5F1O95221 314 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 CLEC3BP05452 202 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 HCKP08631 526 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 CCL3L1P16619 93 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 TNFRSF1BP20333 461 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 MYF6P23409 242 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 MAPK3P27361 379 aaPredicted RBP5.49□□□□□ -1.53
VCAN-206ENST00000505615 GRK5P34947 590 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 GGT2P36268 569 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 SLC1A6P48664 564 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 DLX6P56179 175 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 MZT1Q08AG7 82 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 ZNF273Q14593 569 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 WHAMMP3Q1A5X7 153 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 ABCA11PQ4W5N1 156 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 GLYATL3Q5SZD4 288 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 SLC18B1Q6NT16 456 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 C16orf82Q7Z2V1 217 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 ZNF329Q86UD4 541 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 C17orf53Q8N3J3 647 aaPredicted RBP5.49□□□□□ -1.53
VCAN-206ENST00000505615 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 OR13C2Q8NGS9 318 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 OR10Z1Q8NGY1 313 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 OR51A7Q8NH64 312 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 LINC00476Q8WZB0 136 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 BPIFA2Q96DR5 249 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 ATF6BQ99941 703 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 VNN3Q9NY84 501 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 MED31Q9Y3C7 131 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 LRP12Q9Y561 859 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 LYVE1Q9Y5Y7 322 aa5.49□□□□□ -1.53
VCAN-206ENST00000505615 PSMB11A5LHX3 300 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 SEC14L6B5MCN3 397 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 M0R135 149 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 CCL24O00175 119 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 DCTN6O00399 190 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 XKRYO14609 159 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 CDIPTO14735 213 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 LY86O95711 162 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 ARG1P05089 322 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 CD14P08571 375 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 PGA5P0DJD9 388 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 IFI30P13284 250 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 PPIBP23284 216 aaKnown RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 OTX1P32242 354 aaPredicted RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 NAA10P41227 235 aaPredicted RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 RAB25P57735 213 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 TMED1Q13445 227 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 KRR1Q13601 381 aaKnown RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 SEC23BQ15437 767 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 DEFB136Q30KP8 78 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 RFX4Q33E94 735 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 PAGE3Q5JUK9 113 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 TMEM200BQ69YZ2 307 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 ZNF770Q6IQ21 691 aaPredicted RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 PTCHD4Q6ZW05 846 aa5.48□□□□□ -1.53
VCAN-206ENST00000505615 TSEN54Q7Z6J9 526 aaKnown RBP5.48□□□□□ -1.53
VCAN-206ENST00000505615 PIGWQ7Z7B1 504 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms