RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ACKR3P25106 362 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 TAS2R46P59540 309 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 PLPPR5Q32ZL2 321 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 SP6Q3SY56 376 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 CHRFAM7AQ494W8 412 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 MIDNQ504T8 468 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF283Q8N7M2 679 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 SLC38A9Q8NBW4 561 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 MRPL38Q96DV4 380 aaKnown RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 RSRP1Q9BUV0 290 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PPH5 198 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 C7orf77A4D0Y5 90 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 RHPN2P1A8MT19 583 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 SGCEO43556 437 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 IGHG1P01857 330 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 FAHP16930 419 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 SNCAP37840 140 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 PTGDSP41222 190 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 ARL4DP49703 201 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 RRADP55042 308 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 RSPO1Q2MKA7 263 aaPredicted RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 EIF5AL1Q6IS14 154 aaKnown RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 DOK3Q7L591 496 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 RAB33BQ9H082 229 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 IGHV1OR21-1A0A087WYE8 117 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1B0GX78 115 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 hCG_1809904A0A1W2PP81 198 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PR64 198 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PRV1 198 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 SCGB1D2O95969 90 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 GLI4P10075 376 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 PRF1P14222 555 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 C14orf28Q4W4Y0 310 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 D2HGDHQ8N465 521 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 OR9K2Q8NGE7 335 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 C1orf123Q9NWV4 160 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 PISDQ9UG56 409 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 ZDHHC8Q9ULC8 765 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 ABCA7Q8IZY2 2146 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 ETV2O00321 342 aaPredicted RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 JTBO76095 146 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 MBPP02686 304 aaPredicted RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 GAPDHP04406 335 aaKnown RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 RBMXP38159 391 aaKnown RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 HIST3H3Q16695 136 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 NSUN5P2Q63ZY6 315 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 TMEM156Q8N614 296 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 PLPP5Q8NEB5 264 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 STT3BQ8TCJ2 826 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 PIGTQ969N2 578 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
UBE3D-206ENST00000505226 SEBOXQ9HB31 216 aaPredicted RBP10.41□□□□□ -0.74
UBE3D-206ENST00000505226 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 IGLV3-1P01715 115 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 FABP1P07148 127 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 FCGR2AP12318 317 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 GABRR1P24046 479 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 CD38P28907 300 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 FAM3AP98173 230 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 FABP9Q0Z7S8 132 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 SMCO1Q147U7 214 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 TSPO2Q5TGU0 170 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 FNDC9Q8TBE3 224 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 ARV1Q9H2C2 271 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 C14orf166Q9Y224 244 aaKnown RBP10.4□□□□□ -0.74
UBE3D-206ENST00000505226 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 IGHV1OR15-9A0A0B4J2B8 117 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 DIRAS3O95661 229 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 ARG1P05089 322 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 ALDH3B1P43353 468 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 EIF5AP63241 154 aaKnown RBP10.4□□□□□ -0.74
UBE3D-206ENST00000505226 PHYHD1Q5SRE7 291 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 OGFOD3Q6PK18 319 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 OR10G3Q8NGC4 313 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF501Q96CX3 271 aaPredicted RBP10.4□□□□□ -0.74
UBE3D-206ENST00000505226 GNRHR2Q96P88 292 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 KLRF1Q9NZS2 232 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 MEMO1Q9Y316 297 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 CABIN1Q9Y6J0 2220 aa10.4□□□□□ -0.74
UBE3D-206ENST00000505226 ASCC3Q8N3C0 2202 aaKnown RBP10.4□□□□□ -0.75
UBE3D-206ENST00000505226 OR5H15A6NDH6 313 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 F5H5K5 113 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 XRCC2O43543 280 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF806P0C7X5 589 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF43P17038 809 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SFTPDP35247 375 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 UCP2P55851 309 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SURF2Q15527 256 aaPredicted RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF239Q16600 458 aaKnown RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 KRBOX4Q5JUW0 171 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 RPUSD3Q6P087 351 aaKnown RBP10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SLC16A14Q7RTX9 510 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 ANKRD37Q7Z713 158 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 SULF2Q8IWU5 870 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 RNF138Q8WVD3 245 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 REEP6Q96HR9 211 aa10.39□□□□□ -0.75
UBE3D-206ENST00000505226 TM2D1Q9BX74 207 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms