RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 OR52H1Q8NGJ2 320 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 OR6N2Q8NGY6 317 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 HPSE2Q8WWQ2 592 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 OR5P3Q8WZ94 311 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 FOXRED1Q96CU9 486 aaPredicted RBP5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 LYZL4Q96KX0 146 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 ATP6V1G3Q96LB4 118 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 SIKE1Q9BRV8 207 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 ZNF649Q9BS31 505 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 OR10A2Q9H208 303 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 C1orf21Q9H246 121 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 EGLN3Q9H6Z9 239 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 SAR1AQ9NR31 198 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 USE1Q9NZ43 259 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 ZNF319Q9P2F9 582 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 ZNF222Q9UK12 451 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 TSSC4Q9Y5U2 329 aaPredicted RBP5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 MPC1Q9Y5U8 109 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 RYR3Q15413 4870 aa5.54□□□□□ -1.52
NPIPB3-203ENST00000504841 SH2D7A6NKC9 451 aaPredicted RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 RFPL4AA6NLU0 287 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 VGLL3A8MV65 326 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 HMGB1P1B2RPK0 211 aaPredicted RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 ZNF732B4DXR9 585 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 RFPL4AL1F8VTS6 287 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 NME4O00746 187 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 IDH3BO43837 385 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 ACKR3P25106 362 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 DCTDP32321 178 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 MAP2K3P46734 347 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 NUDT2P50583 147 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 OR12D2P58182 307 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 COL10A1Q03692 680 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 SLC34A1Q06495 639 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 EGFEM1PQ0D2K5 195 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 DCTN2Q13561 401 aaKnown RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 SNCBQ16143 134 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 LDLRAD2Q5SZI1 272 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 HAGHLQ6PII5 290 aaPredicted RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 C10orf99Q6UWK7 81 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 ZDHHC23Q8IYP9 409 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 C11orf42Q8N5U0 333 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 CD177Q8N6Q3 437 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 LINC00482Q8N8I6 264 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 FAM81AQ8TBF8 368 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 CAPSLQ8WWF8 208 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 TFAP2CQ92754 450 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 OTULINQ96BN8 352 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 ZNF488Q96MN9 340 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 HIST1H2AAQ96QV6 131 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 ASCL2Q99929 193 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 KCTD14Q9BQ13 255 aaPredicted RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 FUZQ9BT04 418 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 GPR61Q9BZJ8 451 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 TBC1D23Q9NUY8 699 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 GAR1Q9NY12 217 aaKnown RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 AP3M1Q9Y2T2 418 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 TBL2Q9Y4P3 447 aaKnown RBP5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
NPIPB3-203ENST00000504841 FAM90A8PA6NJQ4 464 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 SLC1A7O00341 560 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 SLC22A2O15244 555 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 LPLP06858 475 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 H2BFMP0C1H6 154 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 CD24P25063 80 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 LMO1P25800 156 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 RRM2P31350 389 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 IFNGR2P38484 337 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 GSSP48637 474 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 EDDM3BP56851 147 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 SMIM11AP58511 58 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 GNG3P63215 75 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 TNP2Q05952 138 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 SMIM21Q3B7S5 101 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 KLHL22Q53GT1 634 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 C9orf152Q5JTZ5 239 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ZNF626Q68DY1 528 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ACP7Q6ZNF0 438 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 PRSS45Q7RTY3 260 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 COMMD2Q86X83 199 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ERI1Q8IV48 349 aaKnown RBP5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 OR9Q2Q8NGE9 314 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 OR13D1Q8NGV5 346 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 OR2T27Q8NH04 317 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ZNF671Q8TAW3 534 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 NDNFQ8TB73 568 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 GNPDA2Q8TDQ7 276 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 MALSU1Q96EH3 234 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 SDSLQ96GA7 329 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 C7orf34Q96L11 122 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 DHRS1Q96LJ7 313 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 INTS14Q96SY0 518 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 AMELYQ99218 206 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ABHD6Q9BV23 337 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 RGCCQ9H4X1 137 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 ABCB9Q9NP78 766 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 MRGBPQ9NV56 204 aa5.52□□□□□ -1.53
NPIPB3-203ENST00000504841 TAS2R1Q9NYW7 299 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms