RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 LCN8Q6JVE9 175 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 C8orf86Q6ZUL3 223 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 FAM57BQ71RH2 274 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 OSR2Q8N2R0 312 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 OR2T4Q8NH00 348 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 PIGCQ92535 297 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 LYZL4Q96KX0 146 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 LYSTQ99698 3801 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 OR10A2Q9H208 303 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 RASL12Q9NYN1 266 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 FAM32AQ9Y421 112 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
PDLIM7-210ENST00000503827 DNAH7Q8WXX0 4024 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 RFPL4AA6NLU0 287 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 NUDT19A8MXV4 375 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 RFPL4AL1F8VTS6 287 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 MTRF1O75570 445 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 CST4P01036 141 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 LYPD4Q6UWN0 246 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 CBLL1Q75N03 491 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 CD177Q8N6Q3 437 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 HPSE2Q8WWQ2 592 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 HSH2DQ96JZ2 352 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 P2RX4Q99571 388 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 FGF23Q9GZV9 251 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 RGCCQ9H4X1 137 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 VNN3Q9NY84 501 aa12.58□□□□□ -0.4
PDLIM7-210ENST00000503827 TRBV4-1A0A0J9YWV2 114 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNF593O00488 134 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 MRASO14807 208 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 RBP4P02753 201 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 PGA5P0DJD9 388 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 PIPP12273 146 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 ECI1P42126 302 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 GPM6AP51674 278 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 DLX6P56179 175 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 IL18R1Q13478 541 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 SEC23BQ15437 767 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 COQ5Q5HYK3 327 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 PRSS45Q7RTY3 260 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 OR2W3Q7Z3T1 314 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 FAM86B1Q8N7N1 296 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 OR51L1Q8NGJ5 315 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 TLCD1Q96CP7 247 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 PGAM5Q96HS1 289 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 BRD7Q9NPI1 651 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 CD300AQ9UGN4 299 aa12.57□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNF732B4DXR9 585 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 SLC22A2O15244 555 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 FMO3P31513 532 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 PRDX2P32119 198 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 RAB25P57735 213 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNF121P58317 390 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 GNG3P63215 75 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 C9orf66Q5T8R8 295 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ACP7Q6ZNF0 438 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 STMN2Q93045 179 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 OR51I2Q9H344 312 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 GID8Q9NWU2 228 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 ZNF319Q9P2F9 582 aa12.56□□□□□ -0.4
PDLIM7-210ENST00000503827 DHRS12A0PJE2 317 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 CXCR6O00574 342 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 SERPINA1P01009 418 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 TK1P04183 234 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 RHCEP18577 417 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 ACKR3P25106 362 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 BRS3P32247 399 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 ACTA2P62736 377 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 ACTG2P63267 376 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 ACTC1P68032 377 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 ACTA1P68133 377 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 TEX30Q5JUR7 227 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 OR52J3Q8NH60 311 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 BCAS4Q8TDM0 211 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 PARD6BQ9BYG5 372 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM7-210ENST00000503827 SMAD5-AS1Q9Y6J3 95 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms