RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 EBPQ15125 230 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ELOA3BQ3SY89 546 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SCGB2B2Q4G0G5 96 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 C1orf100Q5SVJ3 147 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FAM182BQ5T319 152 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PRR27Q6MZM9 219 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM92Q6UXU6 159 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FRRS1Q6ZNA5 592 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CYP2G1PQ6ZSU1 146 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SSX8Q7RTT4 187 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF550Q7Z398 422 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NUFIP2Q7Z417 695 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 C20orf196Q8IYI0 205 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CSNK1A1LQ8N752 337 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ZFP41Q8N8Y5 198 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SUMF1Q8NBK3 374 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ELOA3Q8NG57 546 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 WFDC5Q8TCV5 224 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PEX11GQ96HA9 241 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TXN2Q99757 166 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ADGRL4Q9HBW9 690 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MKKSQ9NPJ1 570 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PRSS16Q9NQE7 514 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CPA4Q9UI42 421 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 RAB22AQ9UL26 194 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 AK6Q9Y3D8 172 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NBEAQ8NFP9 2946 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TRBV23-1A0A0A0MS06 115 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 DUXBA0A1W2PPF3 345 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SHISA3A0PJX4 238 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MAP1LC3B2A6NCE7 125 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SIAH2O43255 324 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CBR3O75828 277 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TNFSF13O75888 250 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 VENTXO95231 258 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 WNT11O96014 354 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SMIM17P0DL12 118 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PGAM2P15259 253 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SFTPDP35247 375 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 RPL23AP62750 156 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 BAXQ07812 192 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OLIG2Q13516 323 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MPV17LQ2QL34 196 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NCMAPQ5T1S8 102 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OR2A2Q6IF42 318 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 C12orf54Q6X4T0 127 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 COX15Q7KZN9 410 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FADS6Q8N9I5 356 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OR1P1Q8NH06 330 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM204Q9BSN7 226 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SSBP4Q9BWG4 385 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MAP1LC3BQ9GZQ8 125 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CHST6Q9GZX3 395 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 LAT2Q9GZY6 243 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 RBKSQ9H477 322 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 STARD5Q9NSY2 213 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OR5V1Q9UGF6 321 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 C17orf112F2Z3M2 114 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 J3QR06 171 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CDIPTO14735 213 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OR10H2O60403 315 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 TBX18O95935 607 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SCGB1D2O95969 90 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 HLA-HP01893 362 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FABP4P15090 132 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ADCYAP1P18509 176 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MAKP20794 623 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ACHEP22303 614 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 MPLP40238 635 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 AKR1C2P52895 323 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ERVS71-1P61550 626 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 YBX1P67809 324 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SLC35A1P78382 337 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 QRFPP83859 136 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 AKR1C1Q04828 323 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SKP2Q13309 424 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SMAD4Q13485 552 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NSDHLQ15738 373 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF805Q5CZA5 627 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PRRT3Q5FWE3 981 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 EMC4Q5J8M3 183 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FBXW9Q5XUX1 488 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF595Q8IYB9 648 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 SPEM1Q8N4L4 309 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NOXO1Q8NFA2 376 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 GPR32P1Q8NGA4 272 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 OR1N1Q8NGS0 311 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 DVL3Q92997 716 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NEIL2Q969S2 332 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NUDT11Q96G61 164 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 VSTM2LQ96N03 204 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 NUDT9Q9BW91 350 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 CNTD2Q9H8S5 307 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PROK2Q9HC23 129 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 IL36GQ9NZH8 169 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 FOXJ2Q9P0K8 574 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 RNF181Q9P0P0 153 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 KLK11Q9UBX7 282 aa2.46□□□□□ -2.02
NEDD4-204ENST00000503468 C14orf166Q9Y224 244 aaKnown RBP2.46□□□□□ -2.02
NEDD4-204ENST00000503468 PUS1Q9Y606 427 aaKnown RBP eCLIP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms