RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DEPPQ9NTK1 212 aa3.49□□□□□ -1.85
HMGB1P21-201ENST00000502313 RBM22Q9NW64 420 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P21-201ENST00000502313 BABAM2Q9NXR7 383 aa3.49□□□□□ -1.85
HMGB1P21-201ENST00000502313 RNF7Q9UBF6 113 aa3.49□□□□□ -1.85
HMGB1P21-201ENST00000502313 SLC22A13Q9Y226 551 aa3.49□□□□□ -1.85
HMGB1P21-201ENST00000502313 CACNA1IQ9P0X4 2223 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 KMT2EQ8IZD2 1858 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TRAV19A0A0A6YYK7 116 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 A0A0B4J2E0 115 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 A0A1B0GVI7 797 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 A0A1B0GX12 115 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TRABD2BA6NFA1 517 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TMEM238C9JI98 176 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 E9PAM4 449 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 E9PLD3 99 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 G3V2L1 256 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 DFFAO00273 331 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 BIRC5O15392 142 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TGOLN2O43493 480 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 HCRTO43612 131 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 SNAP29O95721 258 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 RAB36O95755 333 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FAM107AO95990 144 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 GCGP01275 180 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TCRBP04435 133 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CD55P08174 381 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZDHHC11BP0C7U3 371 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TDGF1P13385 188 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 HSD17B1P14061 328 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FOLR1P15328 257 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TBPP20226 339 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CRABP2P29373 138 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 HCCSP53701 268 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 HMGCS1Q01581 520 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TGFBR3Q03167 851 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FCHO2Q0JRZ9 810 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 SIX1Q15475 284 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 NSUN5P1Q3KNT7 163 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CCDC153Q494R4 210 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 WDR38Q5JTN6 314 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 KCTD16Q68DU8 428 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FRMPD2BQ6IN97 320 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 EPGNQ6UW88 154 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CBLN2Q8IUK8 224 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 BBS7Q8IWZ6 715 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CTAGE3PQ8IX95 158 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 UBALD2Q8IYN6 164 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TBC1D19Q8N5T2 526 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZFP41Q8N8Y5 198 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CCDC71LQ8N9Z2 235 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TMEM178AQ8NBL3 297 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZNF740Q8NDX6 193 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 MAPK15Q8TD08 544 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 NTN5Q8WTR8 489 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FGF13Q92913 245 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 TCEAL4Q96EI5 215 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZNF354BQ96LW1 612 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 MCHR1Q99705 422 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 NUDT9Q9BW91 350 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 HCAR1Q9BXC0 346 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 BARHL1Q9BZE3 327 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 PLA2G2FQ9BZM2 168 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 METTL9Q9H1A3 318 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 C6orf106Q9H6K1 298 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 EBF2Q9HAK2 575 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 SIAEQ9HAT2 523 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 FGFR1OP2Q9NVK5 253 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 THYN1Q9P016 225 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CIDEBQ9UHD4 219 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 SAMD4AQ9UPU9 718 aaKnown RBP3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 PTPRDP23468 1912 aa3.48□□□□□ -1.85
HMGB1P21-201ENST00000502313 CHD6Q8TD26 2715 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 IGHV3-20A0A0C4DH32 117 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 KIR2DS1A0A191URI9 304 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 SLC5A10A0PJK1 596 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 OR2AT4A6NND4 320 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 LYRM9A8MSI8 78 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 C9J4A7 227 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 LOC110117498-PIK3R3F6TDL0 507 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 H7C2Y5 167 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 K7EMT4 169 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 COPEO14579 308 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 SLC31A1O15431 190 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 MAGEC1O60732 1142 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 HPGDSO60760 199 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 SLC2A10O95528 541 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 RBP1P09455 135 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 OR4Q2P0C623 313 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 OR4E1P0C645 316 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 LIMS3P0CW19 117 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 LIMS4P0CW20 117 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 ZNF35P13682 527 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TAC1P20366 129 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 DCTP40126 519 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 MARCKSL1P49006 195 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 CAV2P51636 162 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 PAX9P55771 341 aa3.47□□□□□ -1.85
HMGB1P21-201ENST00000502313 TAS2R31P59538 309 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms