RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 OR4M1Q8NGD0 313 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 CDH10Q9Y6N8 788 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 TCRBV4S1A1TA0A5B7 111 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 SLC22A2O15244 555 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 SYNGR1O43759 233 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 GMNNO75496 209 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 CLUP10909 449 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 COX4I1P13073 169 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 SPI1P17947 270 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 RRM2P31350 389 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 NUDT2P50583 147 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 CRMP1Q14194 572 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 C8orf82Q6P1X6 216 aaPredicted RBP11.21□□□□□ -0.61
CCDC58-207ENST00000498466 LINC00471Q8N535 108 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 OR6N2Q8NGY6 317 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 OR2T27Q8NH04 317 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF671Q8TAW3 534 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 RNF133Q8WVZ7 376 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 MALSU1Q96EH3 234 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 ABHD6Q9BV23 337 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 C1orf21Q9H246 121 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 FGFR1OP2Q9NVK5 253 aa11.21□□□□□ -0.61
CCDC58-207ENST00000498466 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.61
CCDC58-207ENST00000498466 TSSC4Q9Y5U2 329 aaPredicted RBP11.21□□□□□ -0.61
CCDC58-207ENST00000498466 RFPL4AA6NLU0 287 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 ZNF732B4DXR9 585 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 RFPL4AL1F8VTS6 287 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 F2RL2O00254 374 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 SLC1A7O00341 560 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 CLIC3O95833 236 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 H2BFMP0C1H6 154 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 BLVRAP53004 296 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 GNG3P63215 75 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 ZNF273Q14593 569 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 CGB2Q6NT52 195 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 CENPVQ7Z7K6 275 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-207ENST00000498466 ERI1Q8IV48 349 aaKnown RBP11.2□□□□□ -0.62
CCDC58-207ENST00000498466 OR13D1Q8NGV5 346 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 DPF1Q92782 380 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 PYURFQ96I23 114 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 INTS14Q96SY0 518 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 OR51I2Q9H344 312 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 TBC1D23Q9NUY8 699 aa11.2□□□□□ -0.62
CCDC58-207ENST00000498466 MTRF1O75570 445 aaKnown RBP11.19□□□□□ -0.62
CCDC58-207ENST00000498466 OPRL1P41146 370 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 EGFEM1PQ0D2K5 195 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 DYNC1I2Q13409 638 aaKnown RBP11.19□□□□□ -0.62
CCDC58-207ENST00000498466 KHDC1LQ5JSQ8 128 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.19□□□□□ -0.62
CCDC58-207ENST00000498466 ZNF561Q8N587 486 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 CD177Q8N6Q3 437 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 OR8D4Q8NGM9 314 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 LYZL4Q96KX0 146 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 AMELYQ99218 206 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 NMNAT2Q9BZQ4 307 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 INPP5EQ9NRR6 644 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 IL20Q9NYY1 176 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 ABCD2Q9UBJ2 740 aa11.19□□□□□ -0.62
CCDC58-207ENST00000498466 ODF3BA8MYP8 253 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 H3BUI4 141 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 SEMG1P04279 462 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 FABP3P05413 133 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 PIPP12273 146 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-207ENST00000498466 PRDX2P32119 198 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 CEBPDP49716 269 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-207ENST00000498466 OR12D2P58182 307 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 PSME3P61289 254 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 DCTN2Q13561 401 aaKnown RBP11.18□□□□□ -0.62
CCDC58-207ENST00000498466 SMIM21Q3B7S5 101 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 CEACAM21Q3KPI0 293 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 LDLRAD2Q5SZI1 272 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 LINC01590Q5TEZ4 76 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 HAGHLQ6PII5 290 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-207ENST00000498466 HACD2Q6Y1H2 254 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 CALHM1Q8IU99 346 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 OR9Q2Q8NGE9 314 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 AQP3Q92482 292 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 MYDGFQ969H8 173 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
CCDC58-207ENST00000498466 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 HILPDAQ9Y5L2 63 aa11.18□□□□□ -0.62
CCDC58-207ENST00000498466 C17orf98A8MV24 154 aa11.17□□□□□ -0.62
CCDC58-207ENST00000498466 IFNGP01579 166 aa11.17□□□□□ -0.62
CCDC58-207ENST00000498466 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
CCDC58-207ENST00000498466 AZGP1P25311 298 aaKnown RBP11.17□□□□□ -0.62
CCDC58-207ENST00000498466 GSTT1P30711 240 aa11.17□□□□□ -0.62
CCDC58-207ENST00000498466 DYNLT3P51808 116 aa11.17□□□□□ -0.62
CCDC58-207ENST00000498466 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
CCDC58-207ENST00000498466 SAMD4BQ5PRF9 694 aaKnown RBP11.17□□□□□ -0.62
CCDC58-207ENST00000498466 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms