RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 TUSC1Q2TAM9 212 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 PRAMEF20Q5VT98 475 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 SEZ6L2Q6UXD5 910 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 LINC00518Q8N0U6 118 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 TPPP3Q9BW30 176 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 NAT8Q9UHE5 227 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 PLXNB2O15031 1838 aa13.49□□□□□ -0.25
C4A-259ENST00000498271 RBBP6Q7Z6E9 1792 aaKnown RBP13.49□□□□□ -0.25
C4A-259ENST00000498271 A0A1B0GX78 115 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 IAPPP10997 89 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 OR10J1P30954 320 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 KCNAB1Q14722 419 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 SHBQ15464 509 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 C4orf45Q96LM5 186 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 SERGEFQ9UGK8 458 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A087WUJ7 227 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 hCG_1809904A0A1W2PP81 198 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A1W2PPE2 198 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A1W2PR64 198 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A1W2PRV1 198 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 IGHA1P01876 353 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 ADH4P08319 380 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 ZNF17P17021 662 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 ZNF547Q8IVP9 402 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 A0A1B0GX12 115 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 LINC01565O15544 149 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 GLI4P10075 376 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 SULT1A1P50225 295 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 SIGLEC14Q08ET2 396 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 KNL1Q8NG31 2342 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 M0R296 226 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 TIMM8AO60220 97 aaPredicted RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 ZFPL1O95159 310 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 CNN1P51911 297 aaKnown RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 ERVFC1-1P60608 527 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 LYPD8Q6UX82 237 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 OSR2Q8N2R0 312 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 OGG1O15527 345 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 CSN1S1P47710 185 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 LTC4SQ16873 150 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 FAM109BQ6ICB4 259 aaPredicted RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 ZNF573Q86YE8 665 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 ZNF687Q8N1G0 1237 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 AMER3Q8N944 861 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 LINC01555Q8NAE3 123 aa13.48□□□□□ -0.25
C4A-259ENST00000498271 MBD1Q9UIS9 605 aaPredicted RBP13.48□□□□□ -0.25
C4A-259ENST00000498271 TEX50A0A1B0GTY4 177 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 ZNF891A8MT65 544 aaPredicted RBP13.47□□□□□ -0.25
C4A-259ENST00000498271 SH2D1BO14796 132 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 PMCHP20382 165 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 NAAAQ02083 359 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 P2RY1P47900 373 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 SULT1A2P50226 295 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 ETFBKMTQ8IXQ9 262 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 OR10A7Q8NGE5 316 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 CCDC74BQ96LY2 380 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 ALX4Q9H161 411 aaPredicted RBP13.47□□□□□ -0.25
C4A-259ENST00000498271 ARRDC1-AS1Q9H2J1 176 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 WSB2Q9NYS7 404 aaPredicted RBP13.47□□□□□ -0.25
C4A-259ENST00000498271 KIRREL2Q6UWL6 708 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 SPSB1Q96BD6 273 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 SH3BGRL2Q9UJC5 107 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 PPP1R3CQ9UQK1 317 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 GPANK1O95872 356 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 CLDN15P56746 228 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 OR2C3Q8N628 320 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 ZNRF4Q8WWF5 429 aa13.47□□□□□ -0.25
C4A-259ENST00000498271 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 OR2J2O76002 312 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 FBP1P09467 338 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 IFITM2Q01629 132 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 OR2T10Q8NGZ9 312 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 TRIP12Q14669 1992 aaPredicted RBP13.46□□□□□ -0.25
C4A-259ENST00000498271 IGHV3-20A0A0C4DH32 117 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 WDR1O75083 606 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 CST7O76096 145 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 FCER1GP30273 86 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 EMDP50402 254 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 TBC1D28Q2M2D7 210 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 C1orf53Q5VUE5 145 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 PWWP2BQ6NUJ5 590 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 ERGIC1Q969X5 290 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 SIRT3Q9NTG7 399 aaPredicted RBP13.46□□□□□ -0.25
C4A-259ENST00000498271 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
C4A-259ENST00000498271 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms