RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 WNT4P56705 351 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 ALKBH1Q13686 389 aaKnown RBP12.8□□□□□ -0.36
NUP50-219ENST00000497960 SFRP4Q6FHJ7 346 aaPredicted RBP12.8□□□□□ -0.36
NUP50-219ENST00000497960 USP43Q70EL4 1123 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 EGFL6Q8IUX8 553 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 ELMOD2Q8IZ81 293 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 PRSS35Q8N3Z0 413 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 LYZL4Q96KX0 146 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 MICU1Q9BPX6 476 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 ABCB9Q9NP78 766 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 GPR84Q9NQS5 396 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 RHBDD3Q9Y3P4 386 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 CUBNO60494 3623 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 LOC107986453A0A1B0GWG9 222 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 H3BSH0 61 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 NDUFA2O43678 99 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 FSHBP01225 129 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 CD80P33681 288 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 TAS2R43P59537 309 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 NANOS3P60323 173 aaKnown RBP12.79□□□□□ -0.36
NUP50-219ENST00000497960 PAX8Q06710 450 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
NUP50-219ENST00000497960 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 ZNF676Q8N7Q3 588 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 OR1M1Q8NGA1 313 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 RAB40AQ8WXH6 277 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 GATAD2BQ8WXI9 593 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 CDCA4Q9BXL8 241 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 COMMD4Q9H0A8 199 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 MPC1Q9Y5U8 109 aa12.79□□□□□ -0.36
NUP50-219ENST00000497960 IGHV2-70DA0A0C4DH43 119 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 E9PI62 339 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 MTRF1O75570 445 aaKnown RBP12.78□□□□□ -0.36
NUP50-219ENST00000497960 DHRS3O75911 302 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 TGM4P49221 684 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 NPY4RP50391 375 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 HILS1P60008 231 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 RNLSQ5VYX0 342 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 DOK3Q7L591 496 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 SEMA6DQ8NFY4 1073 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 SLC6A7Q99884 636 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 RTL8AQ9BWD3 113 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 YTHDF1Q9BYJ9 559 aaKnown RBP12.78□□□□□ -0.36
NUP50-219ENST00000497960 FRRS1LQ9P0K9 344 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 NUP50Q9UKX7 468 aa12.78□□□□□ -0.36
NUP50-219ENST00000497960 TRBV2A0A0J9YWF9 115 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 PNMA8CA0A1B0GUJ8 204 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 TMEM212A6NML5 194 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ZNF850A8MQ14 1090 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 TRIM77I1YAP6 450 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ADAM20O43506 726 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 SYT7O43581 403 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 CST4P01036 141 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 IGLV3-1P01715 115 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ACKR3P25106 362 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 MAP2K3P46734 347 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 CCR9P51686 369 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 PAX2Q02962 417 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 PRDX4Q13162 271 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 CDK5R1Q15078 307 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 MED22Q15528 200 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 TBCEQ15813 527 aaPredicted RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 CD276Q5ZPR3 534 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 XAF1Q6GPH4 301 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 RPL22L1Q6P5R6 122 aaKnown RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 SVOPQ8N4V2 548 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 GCSAMQ8N6F7 178 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ZFP41Q8N8Y5 198 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 OR5AK2Q8NH90 309 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 C22orf15Q8WYQ4 148 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 PIGCQ92535 297 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 TECTBQ96PL2 329 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 HIST1H2AAQ96QV6 131 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 NUDT16L1Q9BRJ7 211 aaKnown RBP12.77□□□□□ -0.37
NUP50-219ENST00000497960 BABAM2Q9NXR7 383 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 LRRC42Q9Y546 428 aa12.77□□□□□ -0.37
NUP50-219ENST00000497960 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
NUP50-219ENST00000497960 TMEM210A6NLX4 147 aa12.76□□□□□ -0.37
NUP50-219ENST00000497960 OR4C45A6NMZ5 311 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms