RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CDC20Q12834 499 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 NAB1Q13506 487 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 PAGE3Q5JUK9 113 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 C1orf100Q5SVJ3 147 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 OGFRL1Q5TC84 451 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-224ENST00000497488 LPCAT4Q643R3 524 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 METTL7BQ6UX53 244 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 Q6ZVH6 145 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 WDFY1Q8IWB7 410 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 C10orf67Q8IYJ2 551 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 BLIDQ8IZY5 108 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 C4orf32Q8N8J7 132 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 OR51S1Q8NGJ8 323 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 OR9G1Q8NH87 305 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 ENKURQ8TC29 256 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 FAM45AQ8TCE6 357 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 HGDQ93099 445 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 PPWD1Q96BP3 646 aaKnown RBP4.72□□□□□ -1.65
BRCA1-224ENST00000497488 OPTNQ96CV9 577 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 CCDC42Q96M95 316 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 KIR2DL4Q99706 377 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 BCL2L14Q9BZR8 327 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 DHX35Q9H5Z1 703 aaKnown RBP4.72□□□□□ -1.65
BRCA1-224ENST00000497488 JPT2Q9H910 190 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 GUCA1BQ9UMX6 200 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 UGT2A1Q9Y4X1 527 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 RFX7Q2KHR2 1363 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 IGLV1-36A0A0B4J1U3 117 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 FABP7O15540 132 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 DUS4LO95620 317 aaKnown RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 C6orf47O95873 294 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ASS1P00966 412 aaKnown RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 C8orf88P0DMB2 117 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 PRPS1L1P21108 318 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 HTR1DP28221 377 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 NTSP30990 170 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 GTF2H1P32780 548 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 BTCP35070 178 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 KIR3DL2P43630 455 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 LSM6P62312 80 aaKnown RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 CCL7P80098 99 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 TCP10Q12799 353 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 C1orf146Q5VVC0 180 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 SYPL2Q5VXT5 272 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF324BQ6AW86 544 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 SLC13A5Q86YT5 568 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 SLC30A8Q8IWU4 369 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ZFP82Q8N141 532 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 STPG2Q8N412 459 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 METTL13Q8N6R0 699 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 OR4K17Q8NGC6 315 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 BLOC1S5Q8TDH9 187 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 VN1R17PQ8TDU5 208 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 RNF145Q96MT1 663 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 TMEM56Q96MV1 263 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ARL6Q9H0F7 186 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ARV1Q9H2C2 271 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 MFSD1Q9H3U5 465 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 SPANXB1Q9NS25 103 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 DDIT4Q9NX09 232 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ARMCX1Q9P291 453 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF257Q9Y2Q1 563 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 UBIAD1Q9Y5Z9 338 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 PHF3Q92576 2039 aaKnown RBP4.71□□□□□ -1.66
BRCA1-224ENST00000497488 OTOFQ9HC10 1997 aa4.71□□□□□ -1.66
BRCA1-224ENST00000497488 MAST2Q6P0Q8 1798 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 AKAP11Q9UKA4 1901 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 IGHV7-81A0A0B4J1V7 117 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 TNFRSF11BO00300 401 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 BIRC5O15392 142 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CDK1P06493 297 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 UGT2B7P16662 529 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CELP19835 753 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 F2RP25116 425 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CCKARP32238 428 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 IDH2P48735 452 aaKnown RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 RAP1GDS1P52306 607 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 SLC35A1P78382 337 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 AQP6Q13520 282 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 TBC1D28Q2M2D7 210 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CEACAM21Q3KPI0 293 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 AKIRIN2Q53H80 203 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 C2CD6Q53TS8 623 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 NHLRC3Q5JS37 347 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 ANKRD22Q5VYY1 191 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 DNM1P34Q6PK57 102 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CASP12Q6UXS9 341 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 TMUB2Q71RG4 321 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 THOC6Q86W42 341 aaKnown RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 NPWQ8N729 165 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CHST4Q8NCG5 386 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 ZFAND1Q8TCF1 268 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 PIFOQ8TCI5 191 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 SMIM19Q96E16 107 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 ZMYND19Q96E35 227 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 PRAP1Q96NZ9 151 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CHCHD5Q9BSY4 110 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms