RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PLXDC2Q6UX71 529 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM17Q86X19 198 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM251Q8N6I4 163 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 CSNK2A3Q8NEV1 391 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 BORCS8Q96FH0 119 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 MFFQ9GZY8 342 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 PARPBPQ9NWS1 579 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 COMMD9Q9P000 198 aa11.35□□□□□ -0.59
GARNL3-220ENST00000496711 KLF13Q9Y2Y9 288 aaPredicted RBP11.35□□□□□ -0.59
GARNL3-220ENST00000496711 IGKV1-27A0A075B6S5 117 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 NME2P1O60361 137 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 NRASP01111 189 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 NME2P22392 152 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 GABRR1P24046 479 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 OR3A2P47893 321 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 RBP2P50120 134 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 PRSS12P56730 875 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 FAM3AP98173 230 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 RSU1Q15404 277 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 OR8B8Q15620 311 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 NHLRC3Q5JS37 347 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 CASTOR1Q8WTX7 329 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ST6GALNAC5Q9BVH7 336 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 SLC7A10Q9NS82 523 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF587BE7ETH6 402 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 SPRY1O43609 319 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 B3GALNT1O75752 331 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 HTR3BO95264 441 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 CSTBP04080 98 aaKnown RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 SP1P08047 785 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 MEOX1P50221 254 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 NPY4RP50391 375 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ARF1P84077 181 aaKnown RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF92Q03936 586 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM128Q5BJH2 165 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 PEG10Q86TG7 708 aaKnown RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 LHFPL1Q86WI0 220 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 MDS2Q8NDY4 140 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 OR13G1Q8NGZ3 307 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 PCNPQ8WW12 178 aaKnown RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 PRDM14Q9GZV8 571 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-220ENST00000496711 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 KIF25Q9UIL4 384 aa11.34□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF724A8MTY0 619 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 RPL36A-HNRNPH2H7BZ11 118 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 ANGPTL7O43827 346 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 PLATP00750 562 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 SERPINA5P05154 406 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 SLC25A4P12235 298 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 EDN3P14138 238 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 CHRFAM7AQ494W8 412 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 NKAPLQ5M9Q1 402 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 C11orf87Q6NUJ2 197 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 TMEM65Q6PI78 240 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 ASCL4Q6XD76 172 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF546Q86UE3 836 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 OR5AP2Q8NGF4 316 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 FNDC9Q8TBE3 224 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 MAFIPQ8WZ33 124 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 EMG1Q92979 244 aaKnown RBP11.33□□□□□ -0.6
GARNL3-220ENST00000496711 TECTBQ96PL2 329 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 C1QTNF5Q9BXJ0 243 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 PPA2Q9H2U2 334 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 RNF122Q9H9V4 155 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 BCO1Q9HAY6 547 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 PLEKHJ1Q9NW61 149 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 OSGIN2Q9Y236 505 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF407Q9C0G0 2248 aa11.33□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF816-ZNF321PA0A0X1KG74 233 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 FIGNL2A6NMB9 653 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 FAM25EA8MYX2 175 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 KLRC4-KLRK1H3BQV0 150 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 MPGP29372 298 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 P2RX3P56373 397 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF345Q14585 488 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 TOR2AQ5JU69 321 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 KCTD9Q7L273 389 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 CPEB3Q8NE35 698 aaKnown RBP11.32□□□□□ -0.6
GARNL3-220ENST00000496711 OR6K3Q8NGY3 331 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 ANGPTL6Q8NI99 470 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SCARB1Q8WTV0 552 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SPSB4Q96A44 273 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms