RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AQP3Q92482 292 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ZDHHC16Q969W1 377 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 SEH1LQ96EE3 360 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 MED30Q96HR3 178 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 GAFA1Q96PS6 74 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 APOL4Q9BPW4 351 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 V9GYS6 101 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 CENPVL3A0A0U1RRI6 287 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 MDFIC2A0A1B0GVS7 189 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 A0A1W2PQL4 384 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 OR2AT4A6NND4 320 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 J3QT63 122 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 DLGAP1O14490 977 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 RHBDL1O75783 438 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 NRASP01111 189 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 AMY2BP19961 511 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 GLRA1P23415 457 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 CAV3P56539 151 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 GMFBP60983 142 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 RUSC1-AS1Q66K80 236 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 METAP1DQ6UB28 335 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 PLEKHG7Q6ZR37 379 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 CCDC121Q6ZUS5 278 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 SSX6Q7RTT6 188 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF573Q86YE8 665 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 OR10H4Q8NGA5 316 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 TRUB1Q8WWH5 349 aaKnown RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 TMIGD2Q96BF3 282 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 DCTN5Q9BTE1 182 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 CNTD2Q9H8S5 307 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 SNTG1Q9NSN8 517 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 ACOXLQ9NUZ1 547 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 IMPAD1Q9NX62 359 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 USE1Q9NZ43 259 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 ONECUT1Q9UBC0 465 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 SLC25A10Q9UBX3 287 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDAC4-213ENST00000496347 POLDIP2Q9Y2S7 368 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 POMT1Q9Y6A1 747 aa12.97□□□□□ -0.33
HDAC4-213ENST00000496347 EI24O14681 340 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-213ENST00000496347 ACAA1P09110 424 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-213ENST00000496347 SELLP14151 372 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 ATP6V1E1P36543 226 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 POLR2IP36954 125 aaKnown RBP12.96□□□□□ -0.33
HDAC4-213ENST00000496347 ARF6P62330 175 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 KPNB1Q14974 876 aaKnown RBP12.96□□□□□ -0.33
HDAC4-213ENST00000496347 DGUOKQ16854 277 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 Q6YL49 198 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 MOB3CQ70IA8 216 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 FAM220AQ7Z4H9 259 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 FGFRL1Q8N441 504 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 YIPF7Q8N8F6 280 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 POC1AQ8NBT0 407 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 CCDC54Q8NEL0 328 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 OR5T2Q8NGG2 359 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 SSMEM1Q8WWF3 244 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 LHX4Q969G2 390 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF222Q9UK12 451 aa12.96□□□□□ -0.33
HDAC4-213ENST00000496347 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-213ENST00000496347 IGKV1D-17A0A075B6S4 117 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 TRBV23-1A0A0A0MS06 115 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 H3BNX3 289 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 MAGEB4O15481 346 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-213ENST00000496347 ALDH3A2P51648 485 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 RPL15P61313 204 aaKnown RBP12.95□□□□□ -0.34
HDAC4-213ENST00000496347 ACTC1P68032 377 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 ACTA1P68133 377 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 C10orf67Q8IYJ2 551 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 OR14K1Q8NGZ2 314 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 H1FXQ92522 213 aaKnown RBP12.95□□□□□ -0.34
HDAC4-213ENST00000496347 EME1Q96AY2 570 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 SDSLQ96GA7 329 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 HRASLS5Q96KN8 279 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 TBX5Q99593 518 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 SLC22A13Q9Y226 551 aa12.95□□□□□ -0.34
HDAC4-213ENST00000496347 ANKRD61A6NGH8 418 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 M0R1W7 72 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 RPP14O95059 124 aaKnown RBP12.94□□□□□ -0.34
HDAC4-213ENST00000496347 APOL3O95236 402 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 MELTFP08582 738 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 UBCP0CG48 685 aaKnown RBP12.94□□□□□ -0.34
HDAC4-213ENST00000496347 PGA5P0DJD9 388 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 PSG2P11465 335 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 MPZP25189 248 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 HAAOP46952 286 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 ISL1P61371 349 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms