RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RHBDL1O75783 438 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ECDO95905 644 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L2P0CJ85 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L3P0CJ86 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L4P0CJ87 422 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L5P0CJ88 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L6P0CJ89 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L7P0CJ90 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DBTP11182 482 aaKnown RBP17.11■□□□□ 0.33
COL9A2-211ENST00000496215 GLRA1P23415 457 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ELF3P78545 371 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-211ENST00000496215 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4L9Q6RFH8 374 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-211ENST00000496215 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 CCDC54Q8NEL0 328 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ZNF555Q8NEP9 628 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ZFAND2BQ8WV99 257 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 AQP3Q92482 292 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 LGALS12Q96DT0 336 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ADI1Q9BV57 179 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DNTTIP1Q9H147 329 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 NLKQ9UBE8 527 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 DUX4Q9UBX2 424 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ZNF69Q9UC07 566 aa17.11■□□□□ 0.33
COL9A2-211ENST00000496215 ANKRD61A6NGH8 418 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 A6NIN4 97 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 ZNF879B4DU55 563 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 H3BSH0 61 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 J3QT63 122 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 NDUFB3O43676 98 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 FCN3O75636 299 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 LIPFP07098 398 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 IGHV4-38-2P0DP08 117 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 KIR3DL2P43630 455 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 IKZF1Q13422 519 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 RCN1Q15293 331 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 RBMS3Q6XE24 437 aaKnown RBP17.1■□□□□ 0.33
COL9A2-211ENST00000496215 BTN2A1Q7KYR7 527 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 KCTD20Q7Z5Y7 419 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 ZNF573Q86YE8 665 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 ACBD7Q8N6N7 88 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 OR5T2Q8NGG2 359 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 RHOXF1Q8NHV9 184 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 ZNF671Q8TAW3 534 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 TMIGD2Q96BF3 282 aa17.1■□□□□ 0.33
COL9A2-211ENST00000496215 MRPL48Q96GC5 212 aaKnown RBP17.1■□□□□ 0.33
COL9A2-211ENST00000496215 MYCBPQ99417 103 aaPredicted RBP17.1■□□□□ 0.33
COL9A2-211ENST00000496215 MS4A7Q9GZW8 240 aaPredicted RBP17.1■□□□□ 0.33
COL9A2-211ENST00000496215 EXOGQ9Y2C4 368 aaKnown RBP17.1■□□□□ 0.33
COL9A2-211ENST00000496215 IGHV3OR16-10A0A075B7F0 116 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 TRIM77I1YAP6 450 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 HAAOP46952 286 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 IL13RA1P78552 427 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 TUSC1Q2TAM9 212 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 LRRC10Q5BKY1 277 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 ATPAF1Q5TC12 328 aaPredicted RBP17.09■□□□□ 0.33
COL9A2-211ENST00000496215 METTL11BQ5VVY1 283 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.09■□□□□ 0.33
COL9A2-211ENST00000496215 PCGF1Q9BSM1 259 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 POLDIP2Q9Y2S7 368 aa17.09■□□□□ 0.33
COL9A2-211ENST00000496215 PQLC2LA1A4F0 135 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 OR2AT4A6NND4 320 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 GPR37O15354 613 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 GATBO75879 557 aaKnown RBP17.08■□□□□ 0.32
COL9A2-211ENST00000496215 FADS2O95864 444 aaKnown RBP17.08■□□□□ 0.32
COL9A2-211ENST00000496215 PLATP00750 562 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 OR12D2P58182 307 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 LRRC36Q1X8D7 754 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 SMIM21Q3B7S5 101 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 ZNF788Q6ZQV5 615 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 FGFRL1Q8N441 504 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 SIGLECL1Q8N7X8 197 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 POC1AQ8NBT0 407 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 OR2G2Q8NGZ5 317 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 ANGPTL6Q8NI99 470 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 TRMT10AQ8TBZ6 339 aaKnown RBP17.08■□□□□ 0.32
COL9A2-211ENST00000496215 C4orf36Q96KX1 117 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 GAFA1Q96PS6 74 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 ALG8Q9BVK2 526 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 CHST5Q9GZS9 411 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 C8orf4Q9NR00 106 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 RPUSD1Q9UJJ7 312 aaKnown RBP17.08■□□□□ 0.32
COL9A2-211ENST00000496215 SLC7A11Q9UPY5 501 aa17.08■□□□□ 0.32
COL9A2-211ENST00000496215 J3QLW9 94 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 TOX4O94842 621 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 SFTPBP07988 381 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 HTR1AP08908 422 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 SELLP14151 372 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 ZNF19P17023 458 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 RAB40BQ12829 278 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 GPR157Q5UAW9 335 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 TMEM244Q5VVB8 128 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 FDX2Q6P4F2 183 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 C9orf139Q6ZV77 190 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 PACRGLQ8N7B6 248 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 NPRL2Q8WTW4 380 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 APH1BQ8WW43 257 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 RNF166Q96A37 237 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-211ENST00000496215 C10orf35Q96D05 121 aa17.07■□□□□ 0.32
COL9A2-211ENST00000496215 MED30Q96HR3 178 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms