RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 IGHV1-46P01743 117 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 STAG3L3P0CL85 134 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 PAFAH1B2P68402 229 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 C2orf54Q08AI8 447 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ADIGQ0VDE8 80 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 TRDNQ13061 729 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 TSC22D1Q15714 1073 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 DEFB134Q4QY38 66 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ZNF678Q5SXM1 525 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 MLIPQ5VWP3 458 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 THOC7Q6I9Y2 204 aaKnown RBP1.57□□□□□ -2.16
VPS50-219ENST00000495039 FAM131AQ6UXB0 335 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 USP50Q70EL3 339 aaPredicted RBP1.57□□□□□ -2.16
VPS50-219ENST00000495039 TMCO2Q7Z6W1 182 aaPredicted RBP1.57□□□□□ -2.16
VPS50-219ENST00000495039 ING5Q8WYH8 240 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ARV1Q9H2C2 271 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 PRSS16Q9NQE7 514 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ZNF302Q9NR11 478 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 CHRAC1Q9NRG0 131 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 STX18Q9P2W9 335 aaKnown RBP1.57□□□□□ -2.16
VPS50-219ENST00000495039 PPIL1Q9Y3C6 166 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 SLC22A7Q9Y694 548 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ENPP4Q9Y6X5 453 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 PHLPP2Q6ZVD8 1323 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 WDR19Q8NEZ3 1342 aa1.57□□□□□ -2.16
VPS50-219ENST00000495039 ARPC4-TTLL3A0A0A6YYG9 625 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 TRAV8-4A0A0B4J246 113 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 ZNF99A8MXY4 864 aaPredicted RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 TRDMT1O14717 391 aaKnown RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 AKR7A2O43488 359 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 FSTL3O95633 263 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 P01737 135 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 INAFM2P0DMQ5 153 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 ZNF35P13682 527 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 HRES1P13985 223 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 PMCHP20382 165 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 GABRR2P28476 465 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 RGS6P49758 472 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 GRB2P62993 217 aaKnown RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 ATP5G2Q06055 141 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 PIP5KL1Q5T9C9 394 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 FAM104BQ5XKR9 115 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 MRPL21Q7Z2W9 205 aaKnown RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 LRRC8AQ8IWT6 810 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 PROKR2Q8NFJ6 384 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 OR2M7Q8NG81 312 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 ZNF420Q8TAQ5 688 aaPredicted RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 AGR3Q8TD06 166 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 CERS2Q96G23 380 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 ZBED3Q96IU2 234 aaPredicted RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 DERL3Q96Q80 235 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 GABRG3Q99928 467 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 API5Q9BZZ5 524 aaKnown RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 STMN4Q9H169 189 aaPredicted RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 ARMC7Q9H6L4 198 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 TRIM45Q9H8W5 580 aaPredicted RBP1.56□□□□□ -2.16
VPS50-219ENST00000495039 INIPQ9NRY2 104 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 ZNF492Q9P255 531 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 VAX2Q9UIW0 290 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 PLEKHG2Q9H7P9 1386 aa1.56□□□□□ -2.16
VPS50-219ENST00000495039 NACADO15069 1562 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 A0A1B0GTQ1 180 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 IZUMO1RA6ND01 250 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 NCF1BA6NI72 391 aaPredicted RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 NCF1CA8MVU1 366 aaPredicted RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 DFFAO00273 331 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 RALBP11234 206 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 PSMB2P49721 201 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 ACOT2P49753 483 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 PSMD4P55036 377 aaKnown RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 OR12D2P58182 307 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 LCN2P80188 198 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 FBXL19-AS1Q494R0 122 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 TTC19Q6DKK2 380 aaPredicted RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 ULK3Q6PHR2 472 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 LINC00336Q6ZUF6 198 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 TRMT10CQ7L0Y3 403 aaKnown RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 OR2W3Q7Z3T1 314 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 ITPRIPQ8IWB1 547 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 ZCCHC24Q8N2G6 241 aaKnown RBP1.55□□□□□ -2.16
VPS50-219ENST00000495039 CYB561A3Q8NBI2 242 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 ORAOV1Q8WV07 137 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 TMEM234Q8WY98 164 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 PEX13Q92968 403 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 YIPF5Q969M3 257 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 BLZF1Q9H2G9 400 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 OR51B5Q9H339 312 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 DUSP21Q9H596 190 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 OR2S2Q9NQN1 319 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 ASF1BQ9NVP2 202 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 RHBDD3Q9Y3P4 386 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 SBNO1A3KN83 1393 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 SVILO95425 2214 aa1.55□□□□□ -2.16
VPS50-219ENST00000495039 IGHV2OR16-5A0A0B4J2B6 119 aa1.54□□□□□ -2.16
VPS50-219ENST00000495039 A0A1W2PRF3 423 aa1.54□□□□□ -2.16
VPS50-219ENST00000495039 A0A1W2PRM7 423 aa1.54□□□□□ -2.16
VPS50-219ENST00000495039 CENPXA8MT69 81 aa1.54□□□□□ -2.16
VPS50-219ENST00000495039 J3QT63 122 aa1.54□□□□□ -2.16
VPS50-219ENST00000495039 ZNF701M0R085 212 aaPredicted RBP1.54□□□□□ -2.16
VPS50-219ENST00000495039 CASC3O15234 703 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms