RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	OR52N4	Q8NGI2	321 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF671	Q8TAW3	534 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	NPRL2	Q8WTW4	380 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	ACOT12	Q8WYK0	555 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	MARVELD3	Q96A59	401 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	TPK1	Q9H3S4	243 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	PLEKHF2	Q9H8W4	249 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	FN3KRP	Q9HA64	309 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	SAP30L	Q9HAJ7	183 aa		11.52	□□□□□ -0.57
APTX-231	ENST00000494973	AK6	Q9Y3D8	172 aa	Known RBP	11.52	□□□□□ -0.57
APTX-231	ENST00000494973	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.52	□□□□□ -0.57
APTX-231	ENST00000494973	COL12A1	Q99715	3063 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973		A6NLC8	198 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	LRRC30	A6NM36	301 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	NAT2	P11245	290 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF182	P17025	639 aa	Predicted RBP	11.51	□□□□□ -0.57
APTX-231	ENST00000494973	ADRA2C	P18825	462 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	MPZ	P25189	248 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	HTR2C	P28335	458 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	RPS19	P39019	145 aa	Known RBP	11.51	□□□□□ -0.57
APTX-231	ENST00000494973	HAAO	P46952	286 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	IL24	Q13007	206 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	PXT1	Q8NFP0	134 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	OR11L1	Q8NGX0	322 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	NDNF	Q8TB73	568 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	ORAI1	Q96D31	301 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	MEGF10	Q96KG7	1140 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	OR2V2	Q96R30	315 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	CCL19	Q99731	98 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	CST11	Q9H112	138 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	TLNRD1	Q9H1K6	362 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	OR51I2	Q9H344	312 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	RNF167	Q9H6Y7	350 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	ABRACL	Q9P1F3	81 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	STEAP1	Q9UHE8	339 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973	LAMP3	Q9UQV4	416 aa		11.51	□□□□□ -0.57
APTX-231	ENST00000494973		A0A1W2PPR1	153 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	SHISA3	A0PJX4	238 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973		F5H5P2	479 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	BPNT1	O95861	308 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	SOD3	P08294	240 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	ACAA1	P09110	424 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	CALCB	P10092	127 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	IRF2	P14316	349 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	PTGFR	P43088	359 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	POU3F4	P49335	361 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	MRPS11	P82912	194 aa	Known RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF154	Q13106	437 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	HNRNPA0	Q13151	305 aa	Known RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	SPCS2	Q15005	226 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF181	Q2M3W8	571 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	AWAT2	Q6E213	333 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	MZT2A	Q6P582	158 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	FIP1L1	Q6UN15	594 aa	Known RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	C1orf87	Q8N0U7	546 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	OR10Z1	Q8NGY1	313 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	TBC1D15	Q8TC07	691 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	DYNC2LI1	Q8TCX1	351 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	TNFAIP8L1	Q8WVP5	186 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	CACNG6	Q9BXT2	260 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	METTL9	Q9H1A3	318 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	IL36G	Q9NZH8	169 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973	ETV7	Q9Y603	341 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	A3GALT2	U3KPV4	340 aa		11.5	□□□□□ -0.57
APTX-231	ENST00000494973	FASN	P49327	2511 aa	Known RBP	11.5	□□□□□ -0.57
APTX-231	ENST00000494973		H0YL77	283 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973		H3BUI4	141 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	GRP	P07492	148 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	TMEM225B	P0DP42	221 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	THBS2	P35442	1172 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	CFHR2	P36980	270 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	PDZK1IP1	Q13113	114 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	MAB21L1	Q13394	359 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	FOXB2	Q5VYV0	432 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	HAGHL	Q6PII5	290 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-231	ENST00000494973	OR2W3	Q7Z3T1	314 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	LYPD6	Q86Y78	171 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF295-AS1	Q8N0V1	137 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973		Q8TCH9	128 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	ITLN1	Q8WWA0	313 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	DVL3	Q92997	716 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-231	ENST00000494973	MRPS24	Q96EL2	167 aa	Known RBP	11.49	□□□□□ -0.57
APTX-231	ENST00000494973	POM121	Q96HA1	1249 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	VRK1	Q99986	396 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-231	ENST00000494973	CNTD2	Q9H8S5	307 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	BARX1	Q9HBU1	254 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-231	ENST00000494973	SMURF1	Q9HCE7	757 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	DLL4	Q9NR61	685 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	DAPK2	Q9UIK4	370 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973	TENM4	Q6N022	2769 aa		11.49	□□□□□ -0.57
APTX-231	ENST00000494973		A0A0G2JK05	382 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	LOC100289279	A0A1B0GTE1	492 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	TRAPPC2L	H3BP13	241 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	SCGN	O76038	276 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	KDM4B	O94953	1096 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	CD8A	P01732	235 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	CSTB	P04080	98 aa	Known RBP	11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ARSB	P15848	533 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms