RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TUBG2Q9NRH3 451 aa2.58□□□□□ -2
SMC4-224ENST00000494612 OPN4Q9UHM6 478 aa2.58□□□□□ -2
SMC4-224ENST00000494612 HYOU1Q9Y4L1 999 aa2.58□□□□□ -2
SMC4-224ENST00000494612 KIAA1671Q9BY89 1806 aa2.58□□□□□ -2
SMC4-224ENST00000494612 DENND4AQ7Z401 1863 aa2.58□□□□□ -2
SMC4-224ENST00000494612 MYH7P12883 1935 aa2.58□□□□□ -2
SMC4-224ENST00000494612 MYO10Q9HD67 2058 aa2.57□□□□□ -2
SMC4-224ENST00000494612 BRWD1Q9NSI6 2320 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PLXNA4Q9HCM2 1894 aa2.57□□□□□ -2
SMC4-224ENST00000494612 COLCA2A8K830 154 aa2.57□□□□□ -2
SMC4-224ENST00000494612 NDUFC2-KCTD14E9PQ53 114 aa2.57□□□□□ -2
SMC4-224ENST00000494612 GABRPO00591 440 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PLPP1O14494 284 aa2.57□□□□□ -2
SMC4-224ENST00000494612 OTCP00480 354 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CSTAP01040 98 aa2.57□□□□□ -2
SMC4-224ENST00000494612 OR8U9P0C7N5 309 aa2.57□□□□□ -2
SMC4-224ENST00000494612 LINC00869P0C866 280 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CT45A6P0DMU7 189 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CT45A5P0DMU8 189 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CT45A7P0DMV0 189 aa2.57□□□□□ -2
SMC4-224ENST00000494612 MUC1P15941 1255 aaPredicted RBP2.57□□□□□ -2
SMC4-224ENST00000494612 RFC3P40938 356 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CACNG7P62955 275 aa2.57□□□□□ -2
SMC4-224ENST00000494612 IRF8Q02556 426 aa2.57□□□□□ -2
SMC4-224ENST00000494612 IFT88Q13099 833 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ART3Q13508 389 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ITIH4Q14624 930 aa2.57□□□□□ -2
SMC4-224ENST00000494612 KLHL40Q2TBA0 621 aa2.57□□□□□ -2
SMC4-224ENST00000494612 C5orf47Q569G3 176 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CT45A1Q5HYN5 189 aa2.57□□□□□ -2
SMC4-224ENST00000494612 SPESP1Q6UW49 350 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CBLN2Q8IUK8 224 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ZNF561Q8N587 486 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PQLC3Q8N755 202 aa2.57□□□□□ -2
SMC4-224ENST00000494612 C11orf72Q8NBR9 251 aa2.57□□□□□ -2
SMC4-224ENST00000494612 OR56A4Q8NGH8 313 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CT45A3Q8NHU0 189 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PPTC7Q8NI37 304 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CA5BP1Q8WTZ4 195 aa2.57□□□□□ -2
SMC4-224ENST00000494612 GLYATL2Q8WU03 294 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PTX4Q96A99 478 aa2.57□□□□□ -2
SMC4-224ENST00000494612 SEH1LQ96EE3 360 aa2.57□□□□□ -2
SMC4-224ENST00000494612 L3HYPDHQ96EM0 354 aa2.57□□□□□ -2
SMC4-224ENST00000494612 RNF145Q96MT1 663 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CAMK2N2Q96S95 79 aa2.57□□□□□ -2
SMC4-224ENST00000494612 UQCC2Q9BRT2 126 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ANKRD60Q9BZ19 345 aa2.57□□□□□ -2
SMC4-224ENST00000494612 FGF23Q9GZV9 251 aaPredicted RBP2.57□□□□□ -2
SMC4-224ENST00000494612 BOLA2Q9H3K6 86 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PIGUQ9H490 435 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ELOVL6Q9H5J4 265 aa2.57□□□□□ -2
SMC4-224ENST00000494612 XKR8Q9H6D3 395 aa2.57□□□□□ -2
SMC4-224ENST00000494612 HAUS4Q9H6D7 363 aa2.57□□□□□ -2
SMC4-224ENST00000494612 NTN4Q9HB63 628 aa2.57□□□□□ -2
SMC4-224ENST00000494612 PXMP2Q9NR77 195 aa2.57□□□□□ -2
SMC4-224ENST00000494612 DDX19AQ9NUU7 478 aaKnown RBP2.57□□□□□ -2
SMC4-224ENST00000494612 SLC39A1Q9NY26 324 aa2.57□□□□□ -2
SMC4-224ENST00000494612 RCL1Q9Y2P8 373 aaKnown RBP2.57□□□□□ -2
SMC4-224ENST00000494612 ZBED9Q6R2W3 1325 aa2.57□□□□□ -2
SMC4-224ENST00000494612 CCDC171Q6TFL3 1326 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ZDBF2Q9HCK1 2354 aa2.57□□□□□ -2
SMC4-224ENST00000494612 ZFHX2Q9C0A1 2572 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 FRYLO94915 3013 aa2.56□□□□□ -2
SMC4-224ENST00000494612 KBTBD11-OT1A0A1B0GTJ5 212 aa2.56□□□□□ -2
SMC4-224ENST00000494612 C7orf66A4D0T2 115 aa2.56□□□□□ -2
SMC4-224ENST00000494612 GABRR3A8MPY1 467 aa2.56□□□□□ -2
SMC4-224ENST00000494612 M0R3G1 203 aa2.56□□□□□ -2
SMC4-224ENST00000494612 NME4O00746 187 aa2.56□□□□□ -2
SMC4-224ENST00000494612 BCKDKO14874 412 aa2.56□□□□□ -2
SMC4-224ENST00000494612 SPOPO43791 374 aa2.56□□□□□ -2
SMC4-224ENST00000494612 NMT2O60551 498 aa2.56□□□□□ -2
SMC4-224ENST00000494612 FCN3O75636 299 aa2.56□□□□□ -2
SMC4-224ENST00000494612 CCNKO75909 580 aa2.56□□□□□ -2
SMC4-224ENST00000494612 HBE1P02100 147 aa2.56□□□□□ -2
SMC4-224ENST00000494612 MBP02144 154 aa2.56□□□□□ -2
SMC4-224ENST00000494612 IFNW1P05000 195 aa2.56□□□□□ -2
SMC4-224ENST00000494612 KRT16P08779 473 aa2.56□□□□□ -2
SMC4-224ENST00000494612 SMIM10L2AP0DMW4 78 aa2.56□□□□□ -2
SMC4-224ENST00000494612 SMIM10L2BP0DMW5 78 aa2.56□□□□□ -2
SMC4-224ENST00000494612 HOXB8P17481 243 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 CTRB1P17538 263 aa2.56□□□□□ -2
SMC4-224ENST00000494612 PRKACAP17612 351 aa2.56□□□□□ -2
SMC4-224ENST00000494612 RBM34P42696 430 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 TAS2R46P59540 309 aa2.56□□□□□ -2
SMC4-224ENST00000494612 RPS15AP62244 130 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 RAB11AP62491 216 aa2.56□□□□□ -2
SMC4-224ENST00000494612 NCF4Q15080 339 aa2.56□□□□□ -2
SMC4-224ENST00000494612 RAB11BQ15907 218 aa2.56□□□□□ -2
SMC4-224ENST00000494612 TRMT5Q32P41 509 aaKnown RBP2.56□□□□□ -2
SMC4-224ENST00000494612 MPV17L2Q567V2 206 aa2.56□□□□□ -2
SMC4-224ENST00000494612 Q5W150 140 aa2.56□□□□□ -2
SMC4-224ENST00000494612 SHISA6Q6ZSJ9 500 aa2.56□□□□□ -2
SMC4-224ENST00000494612 JAGN1Q8N5M9 183 aa2.56□□□□□ -2
SMC4-224ENST00000494612 CSGALNACT2Q8N6G5 542 aa2.56□□□□□ -2
SMC4-224ENST00000494612 OR6Q1Q8NGQ2 317 aa2.56□□□□□ -2
SMC4-224ENST00000494612 TCEAL3Q969E4 200 aa2.56□□□□□ -2
SMC4-224ENST00000494612 ZNF707Q96C28 371 aaPredicted RBP2.56□□□□□ -2
SMC4-224ENST00000494612 NRBF2Q96F24 287 aa2.56□□□□□ -2
SMC4-224ENST00000494612 CERS2Q96G23 380 aa2.56□□□□□ -2
SMC4-224ENST00000494612 NARS2Q96I59 477 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms