RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NPY4RP50391 375 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 HILS1P60008 231 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 ISL1P61371 349 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 ACTC1P68032 377 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 ACTA1P68133 377 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 RCN1Q15293 331 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 SLC25A30Q5SVS4 291 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 ZBTB37Q5TC79 503 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 STUMQ69YW2 141 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 KRT74Q7RTS7 529 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 LHFPL3Q86UP9 236 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 SIGLECL1Q8N7X8 197 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 OR5A2Q8NGI9 324 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 APH1BQ8WW43 257 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 AQP3Q92482 292 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-224ENST00000494132 DUX5Q96PT3 197 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 PLEKHA1Q9HB21 404 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
ATG4B-224ENST00000494132 SMPD3Q9NY59 655 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-224ENST00000494132 MDFIC2A0A1B0GVS7 189 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 LOC107986453A0A1B0GWG9 222 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 J3QLW9 94 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 INMTO95050 263 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF19P17023 458 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 CCL1P22362 96 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 FPR2P25090 351 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 PEX2P28328 305 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 CFHR2P36980 270 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 HAAOP46952 286 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 GABRA2P47869 451 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 NANOS3P60323 173 aaKnown RBP12.17□□□□□ -0.46
ATG4B-224ENST00000494132 CDONQ4KMG0 1287 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 RUSC1-AS1Q66K80 236 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 TMEM42Q69YG0 159 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 SLC36A1Q7Z2H8 476 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 RHOXF1Q8NHV9 184 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 UPRTQ96BW1 309 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 C4orf36Q96KX1 117 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-224ENST00000494132 GAFA1Q96PS6 74 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 ADI1Q9BV57 179 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 MS4A7Q9GZW8 240 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-224ENST00000494132 ELL3Q9HB65 397 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-224ENST00000494132 NLKQ9UBE8 527 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 EXOGQ9Y2C4 368 aaKnown RBP12.17□□□□□ -0.46
ATG4B-224ENST00000494132 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
ATG4B-224ENST00000494132 FAM230AA0A1W2PPH8 454 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ANKRD61A6NGH8 418 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 SNTNA6NMZ2 147 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 OR2AT4A6NND4 320 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 SLC16A6O15403 523 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 PLATP00750 562 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 HTR1AP08908 422 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 CEBPDP49716 269 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ARF6P62330 175 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 SMN1Q16637 294 aaKnown RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 DGUOKQ16854 277 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 CD276Q5ZPR3 534 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ANGPTL5Q86XS5 388 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 CALHM1Q8IU99 346 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 PDZD9Q8IXQ8 264 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ACBD7Q8N6N7 88 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ZDHHC22Q8N966 263 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF555Q8NEP9 628 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 OR2G2Q8NGZ5 317 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 OR10AC1Q8NH08 325 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 CYGBQ8WWM9 190 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 TMIGD2Q96BF3 282 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 C12orf43Q96C57 262 aaKnown RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 PELI1Q96FA3 418 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 TBX15Q96SF7 602 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ALG8Q9BVK2 526 aa12.16□□□□□ -0.46
ATG4B-224ENST00000494132 ISG20L2Q9H9L3 353 aaKnown RBP12.16□□□□□ -0.46
ATG4B-224ENST00000494132 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 A0A0A6YYJ9 748 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF879B4DU55 563 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 NDUFB3O43676 98 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 MPZL2O60487 215 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 TOX4O94842 621 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 PSG2P11465 335 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 TGM4P49221 684 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 DLX1P56177 255 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF788Q6ZQV5 615 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 Q6ZSR3 168 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 ZNF671Q8TAW3 534 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 CNIH3Q8TBE1 160 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 FRRS1LQ9P0K9 344 aa12.15□□□□□ -0.46
ATG4B-224ENST00000494132 RPUSD1Q9UJJ7 312 aaKnown RBP12.15□□□□□ -0.46
ATG4B-224ENST00000494132 STAB1Q9NY15 2570 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms