RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PKIBQ9C010 78 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A31Q9H0C2 315 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 MAGT1Q9H0U3 335 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 GLIPR2Q9H4G4 154 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 EXO5Q9H790 373 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DDX28Q9NUL7 540 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DDIT4Q9NX09 232 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 CNIH4Q9P003 139 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 UPB1Q9UBR1 384 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 FLVCR2Q9UPI3 526 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 YIPF1Q9Y548 306 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DOCK8Q8NF50 2099 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 TET2Q6N021 2002 aaPredicted RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 TRBV6-6A0A0A6YYG2 114 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NPIPB5A8MRT5 1133 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SUPT3HB4E1H0 165 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRSS46E5RG02 174 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRR23D1E9PI22 279 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 BTN3A3O00478 584 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC17A2O00624 439 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SOCS6O14544 535 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR10H2O60403 315 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BKO60814 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NEURL1O76050 574 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NKX2-2O95096 273 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NSA2O95478 260 aaKnown RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 DDAH2O95865 285 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 MT-ATP6P00846 226 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 BGLAPP02818 100 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BJP06899 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PFN1P07737 140 aaKnown RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 CYC1P08574 325 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SEC11BP0C7V7 166 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRR23D2P0DMB1 279 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 IRF1P10914 325 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF43P17038 809 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SRMP19623 302 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 RAB5AP20339 215 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ANOS1P23352 680 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BOP23527 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 MAT2AP31153 395 aaKnown RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 OTX2P32243 289 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BBP33778 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDKN1BP46527 198 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 DVL1P1P54792 670 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 VSX2P58304 361 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BDP58876 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACTA2P62736 377 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BCP62807 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACTG2P63267 376 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 MRPS6P82932 125 aaKnown RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZP4Q12836 540 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 TEAD2Q15562 447 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST2H2BEQ16778 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZSWIM7Q19AV6 140 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SAPCD1Q5SSQ6 148 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 GLYATL3Q5SZD4 288 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM17Q86X19 198 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 CBLN2Q8IUK8 224 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SERPINA12Q8IW75 414 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM217Q8N7C4 229 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRR26Q8N8Z3 221 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NEXN-AS1Q8NBZ9 246 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ADPRHL1Q8NDY3 354 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPLP0P6Q8NHW5 317 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ST7LQ8TDW4 575 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BHQ93079 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NEIL2Q969S2 332 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 MS4A6EQ96DS6 147 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 URB1-AS1Q96HZ7 61 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 MYADMQ96S97 322 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 PARK7Q99497 189 aaKnown RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BNQ99877 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST1H2BMQ99879 126 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 CHST6Q9GZX3 395 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 C20orf141Q9NUB4 165 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 DNAJC11Q9NVH1 559 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ALKBH4Q9NXW9 302 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 DNAJC27Q9NZQ0 273 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 P2RX2Q9UBL9 471 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF443Q9Y2A4 671 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 KCNE3Q9Y6H6 103 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A0A6YYC8 382 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A1W2PNV4 684 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A1W2PR77 199 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 C5orf51A6NDU8 294 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 IGLON5A6NGN9 336 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR6C75A6NL08 312 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 TEX22C9J3V5 150 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 INAFM1C9JVW0 142 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 FTCDNL1E5RQL4 147 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 I3L1I5 382 aaPredicted RBP2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 I3L521 148 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 J3QLW9 94 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 CCL22O00626 93 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 TAAR5O14804 337 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 SIGLEC5O15389 551 aa2.16□□□□□ -2.06
CDC42EP3-205ENST00000494083 NKX2-8O15522 239 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms