RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 FDX2Q6P4F2 183 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 HAGHLQ6PII5 290 aaPredicted RBP18.76■□□□□ 0.59
SNIP1-203ENST00000493916 PNLDC1Q8NA58 520 aaKnown RBP18.76■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF671Q8TAW3 534 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 JMJD8Q96S16 334 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 RASSF4Q9H2L5 321 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 PLEKHA1Q9HB21 404 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 C8orf4Q9NR00 106 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 GPR173Q9NS66 373 aa18.76■□□□□ 0.59
SNIP1-203ENST00000493916 A0A1B0GW55 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 PQLC2LA1A4F0 135 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L2P0CJ85 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L3P0CJ86 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L4P0CJ87 422 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L5P0CJ88 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L6P0CJ89 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L7P0CJ90 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 AMY2BP19961 511 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 TGM4P49221 684 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 GMFBP60983 142 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 FGF12P61328 243 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4L9Q6RFH8 374 aaPredicted RBP18.75■□□□□ 0.59
SNIP1-203ENST00000493916 BTN2A1Q7KYR7 527 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF573Q86YE8 665 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 FAM216BQ8N7L0 139 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF555Q8NEP9 628 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 OR2G2Q8NGZ5 317 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ANGPTL6Q8NI99 470 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ST8SIA4Q92187 359 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 MRPL48Q96GC5 212 aaKnown RBP18.75■□□□□ 0.59
SNIP1-203ENST00000493916 MYCBPQ99417 103 aaPredicted RBP18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ADI1Q9BV57 179 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 NLKQ9UBE8 527 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 DUX4Q9UBX2 424 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF69Q9UC07 566 aa18.75■□□□□ 0.59
SNIP1-203ENST00000493916 LOC107986453A0A1B0GWG9 222 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 ANKRD61A6NGH8 418 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 NKX6-3A6NJ46 265 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF879B4DU55 563 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 J3QT63 122 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 GPR37O15354 613 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 RGS9O75916 674 aaPredicted RBP18.74■□□□□ 0.59
SNIP1-203ENST00000493916 PLATP00750 562 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 IGHA1P01876 353 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 IGHV4-38-2P0DP08 117 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 GLRA1P23415 457 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 OR12D2P58182 307 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 RAB40BQ12829 278 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF788Q6ZQV5 615 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 C9orf139Q6ZV77 190 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 EGFL6Q8IUX8 553 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 PACRGLQ8N7B6 248 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 APH1BQ8WW43 257 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 C22orf15Q8WYQ4 148 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 C10orf35Q96D05 121 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 INPP5EQ9NRR6 644 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 SNTG1Q9NSN8 517 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 MRPS18AQ9NVS2 196 aaKnown RBP18.74■□□□□ 0.59
SNIP1-203ENST00000493916 RASL12Q9NYN1 266 aa18.74■□□□□ 0.59
SNIP1-203ENST00000493916 A6NIN4 97 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 NDUFB3O43676 98 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 FADS2O95864 444 aaKnown RBP18.73■□□□□ 0.59
SNIP1-203ENST00000493916 ISG15P05161 165 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 HAAOP46952 286 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 CCR9P51686 369 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 GALEQ14376 348 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 RCN1Q15293 331 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 LPCAT4Q643R3 524 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 POC1AQ8NBT0 407 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 OR5T2Q8NGG2 359 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 TMIGD2Q96BF3 282 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 GAFA1Q96PS6 74 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 CHST5Q9GZS9 411 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 FRRS1LQ9P0K9 344 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 RPUSD1Q9UJJ7 312 aaKnown RBP18.73■□□□□ 0.59
SNIP1-203ENST00000493916 POLDIP2Q9Y2S7 368 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 RPL36Q9Y3U8 105 aaKnown RBP18.73■□□□□ 0.59
SNIP1-203ENST00000493916 DOCK11Q5JSL3 2073 aa18.73■□□□□ 0.59
SNIP1-203ENST00000493916 TRAV40A0A0B4J280 105 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 OR2AT4A6NND4 320 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 NOS1APO75052 506 aaPredicted RBP18.72■□□□□ 0.59
SNIP1-203ENST00000493916 GATBO75879 557 aaKnown RBP18.72■□□□□ 0.59
SNIP1-203ENST00000493916 PGA5P0DJD9 388 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 MMP9P14780 707 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 MPZP25189 248 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 IL13RA1P78552 427 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 LRRC10Q5BKY1 277 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 TMEM244Q5VVB8 128 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 SYS1Q8N2H4 156 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 FGFRL1Q8N441 504 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 PELI1Q96FA3 418 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 MED30Q96HR3 178 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 C4orf36Q96KX1 117 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 DMRTB1Q96MA1 342 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 ALG8Q9BVK2 526 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 AMBNQ9NP70 447 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF222Q9UK12 451 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 MYRFQ9Y2G1 1151 aa18.72■□□□□ 0.59
SNIP1-203ENST00000493916 ANK2Q01484 3957 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 J3QLW9 94 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms