RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DISC1C4P0D8 188 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 SSX5O60225 188 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 CA11O75493 328 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 NGFP01138 241 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 CRHP06850 196 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 NAT1P18440 290 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 COX5AP20674 150 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 PTGER4P35408 488 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 PDZK1IP1Q13113 114 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 PPA1Q15181 289 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 KCNJ8Q15842 424 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 GABRA6Q16445 453 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 KRTCAP3Q53RY4 240 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 RTL6Q6ICC9 239 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 NOXA1Q86UR1 476 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 DACT3Q96B18 629 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 WBP1Q96G27 269 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 ARHGAP5-AS1Q96IT6 56 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 Q96M66 194 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 TRAF4Q9BUZ4 470 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 GPN1Q9HCN4 374 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 PTTG3PQ9NZH4 202 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
PTPN7-216ENST00000492977 SERPINE3A8MV23 424 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 SNRPGP15A8MWD9 76 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 K7EM74 188 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 M0QYG6 137 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 WDR1O75083 606 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 RAD51DO75771 328 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 HPXP02790 462 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 AMY2AP04746 511 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 FCER2P06734 321 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF735P0CB33 412 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 WNT5AP41221 380 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 RAD52P43351 418 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 NKX2-5P52952 324 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 LIX1LQ8IVB5 337 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 BPIFB2Q8N4F0 458 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 PRRT1Q99946 306 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 PAPOLGQ9BWT3 736 aaKnown RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 TINAGL1Q9GZM7 467 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 BEX1Q9HBH7 125 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
PTPN7-216ENST00000492977 EIF3KQ9UBQ5 218 aaKnown RBP12.11□□□□□ -0.47
PTPN7-216ENST00000492977 GTF3C1Q12789 2109 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 AKR7A2O43488 359 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 SPRY1O43609 319 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-216ENST00000492977 SSNA1O43805 119 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 LYZL6O75951 148 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 HTR3BO95264 441 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 C1QBP02746 253 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 SULT1A3P0DMM9 295 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 SULT1A4P0DMN0 295 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 PER3P56645 1201 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 PRDX4Q13162 271 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-216ENST00000492977 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 IDO2Q6ZQW0 420 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 SLC36A1Q7Z2H8 476 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 OR4S1Q8NGB4 309 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 ST8SIA4Q92187 359 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF486Q96H40 463 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-216ENST00000492977 PECRQ9BY49 303 aa12.1□□□□□ -0.47
PTPN7-216ENST00000492977 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 ANGPTL7O43827 346 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-216ENST00000492977 TNFSF13O75888 250 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 CGAP01215 116 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 RLN1P04808 185 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 CBR1P16152 277 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 ANXA7P20073 488 aaKnown RBP12.09□□□□□ -0.47
PTPN7-216ENST00000492977 HOXC12P31275 282 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 FOXF2Q12947 444 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 ARFRP1Q13795 201 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 P2RY6Q15077 328 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 ACTBL2Q562R1 376 aa12.09□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF626Q68DY1 528 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 346.9 ms