RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 TRAM2Q15035 370 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 RPL13AP3Q6NVV1 102 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 MDP1Q86V88 176 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 ANKRD46Q86W74 232 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 SYT14Q8NB59 555 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 GNPDA2Q8TDQ7 276 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 RDH5Q92781 318 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 ZNF75AQ96N20 296 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 JMJD8Q96S16 334 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 NIPSNAP1Q9BPW8 284 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 ALX4Q9H161 411 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-213ENST00000492506 C20orf85Q9H1P6 137 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 TMEM38AQ9H6F2 299 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 NIT2Q9NQR4 276 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 RASL12Q9NYN1 266 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 MGAT4CQ9UBM8 478 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.61
HDAC3-213ENST00000492506 GPR160Q9UJ42 338 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
HDAC3-213ENST00000492506 A0A1B0GWJ7 208 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 A8MVM7 634 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 PRODHO43272 600 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 NPIPB7O75200 414 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 CLN5O75503 358 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 ELK1P19419 428 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 CXCL2P19875 107 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 RAB4AP20338 218 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 CXCR1P25024 350 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 ACAA2P42765 397 aaKnown RBP11.2□□□□□ -0.62
HDAC3-213ENST00000492506 SEC23BQ15437 767 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 SYPL1Q16563 259 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 GCNT6Q5T4J0 391 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 MRPL2Q5T653 305 aaKnown RBP11.2□□□□□ -0.62
HDAC3-213ENST00000492506 PRAMEF8Q5VWM4 474 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 PRAMEF7Q5VXH5 474 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 SHISA2Q6UWI4 295 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 C1QL2Q7Z5L3 287 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 KDM8Q8N371 416 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 KLHL36Q8N4N3 616 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 SLC7A13Q8TCU3 470 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
HDAC3-213ENST00000492506 RFKQ969G6 155 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 RNFT2Q96EX2 444 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 SLC6A7Q99884 636 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 TEX12Q9BXU0 123 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 MS4A5Q9H3V2 200 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 TPT1P8Q9HAU6 139 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 CRLF2Q9HC73 371 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 GPR35Q9HC97 309 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 RLIMQ9NVW2 624 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 TAS2R5Q9NYW4 299 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 TAS2R3Q9NYW6 316 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 ABRACLQ9P1F3 81 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 CLEC2DQ9UHP7 191 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 RASD1Q9Y272 281 aa11.2□□□□□ -0.62
HDAC3-213ENST00000492506 TMEM218A2RU14 115 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GABRPO00591 440 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 NCR1O76036 304 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CPSF4O95639 269 aaKnown RBP11.19□□□□□ -0.62
HDAC3-213ENST00000492506 IFNGP01579 166 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 IFNW1P05000 195 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GLAP06280 429 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GKN3PP0CG01 181 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF35P13682 527 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GSTM3P21266 225 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GLRXP35754 106 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 PMELP40967 661 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 ALDH3B1P43353 468 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CCR9P51686 369 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CLDN17P56750 224 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 ZP1P60852 638 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
HDAC3-213ENST00000492506 MRPS11P82912 194 aaKnown RBP11.19□□□□□ -0.62
HDAC3-213ENST00000492506 FABP5Q01469 135 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CEACAM16Q2WEN9 425 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 NKAPLQ5M9Q1 402 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 C1orf140Q5VVS0 124 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 LYPD4Q6UWN0 246 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 LRP11Q86VZ4 500 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 MS4A3Q96HJ5 214 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 GINS4Q9BRT9 223 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 SUCNR1Q9BXA5 334 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 TINAGL1Q9GZM7 467 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-213ENST00000492506 NMNAT1Q9HAN9 279 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-213ENST00000492506 B3GAT1Q9P2W7 334 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 MIOXQ9UGB7 285 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 RCE1Q9Y256 329 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CBY1Q9Y3M2 126 aa11.19□□□□□ -0.62
HDAC3-213ENST00000492506 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 LGALS8O00214 317 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
HDAC3-213ENST00000492506 FZD7O75084 574 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 FSHBP01225 129 aa11.18□□□□□ -0.62
HDAC3-213ENST00000492506 HKR1P10072 659 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms