RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SAMD10Q9BYL1 202 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PIGMQ9H3S5 423 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ESRP2Q9H6T0 727 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF442Q9H7R0 627 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PLCXD1Q9NUJ7 323 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF629Q9UEG4 869 aaPredicted RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ABCA1O95477 2261 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 TRIM77I1YAP6 450 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SLC16A6O15403 523 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ONECUT2O95948 504 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CSF1P09603 554 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CLEC2LP0C7M8 214 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ASAH2BP0C7U1 165 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GAAP10253 952 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SOX18P35713 384 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ARL3P36405 182 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 FOXG1P55316 489 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 AQP6Q13520 282 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 P2RY14Q15391 338 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SOHLH1Q5JUK2 328 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 NLRC3Q7RTR2 1065 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 NAA40Q86UY6 237 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR2Z1Q8NG97 314 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR56B2PQ8NGI1 322 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RNF141Q8WVD5 230 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CCL17Q92583 94 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PTP4A1Q93096 173 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SEC22AQ96IW7 307 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZFP57Q9NU63 452 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF701Q9NV72 531 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ABRACLQ9P1F3 81 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CFAP54Q96N23 3096 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF736B4DX44 427 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 B4DXG7 233 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 BHLHE40O14503 412 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 UBL3O95164 117 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PIPP12273 146 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 FAHP16930 419 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GABRR1P24046 479 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GDNFP39905 211 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 VEGFCP49767 419 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CAV2P51636 162 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GP2P55259 537 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SLC35A2P78381 396 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ASAH1Q13510 395 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR8G1Q15617 311 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 AANATQ16613 207 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 C21orf62-AS1Q17RA5 79 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF684Q5T5D7 378 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PLPP7Q8NBV4 271 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 NPEPL1Q8NDH3 523 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR5D14Q8NGL3 314 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 KCTD12Q96CX2 325 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 MRI1Q9BV20 369 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 AKIP1Q9NQ31 210 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 LAMP3Q9UQV4 416 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SONP18583 2426 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 FREM1Q5H8C1 2179 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 LOC107986453A0A1B0GWG9 222 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 A0A1W2PNV4 684 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 MEIS3P1A6NDR6 274 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CBY3A6NI87 242 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 LGALS8O00214 317 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GABRPO00591 440 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 TRAF3IP2O43734 574 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR7C1O76099 320 aaPredicted RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PNPP00491 289 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 FABP1P07148 127 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CPT2P23786 658 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 G0S2P27469 103 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CHRNB4P30926 498 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 THBS2P35442 1172 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RPS19P39019 145 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RPS23P62266 143 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 GRB2P62993 217 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 CDK5Q00535 292 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ALKBH1Q13686 389 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RBM39Q14498 530 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 HMGN3Q15651 99 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 RAB11BQ15907 218 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SKA3Q8IX90 412 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 MKXQ8IYA7 352 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF679Q8IYX0 411 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OR6K3Q8NGY3 331 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OIT3Q8WWZ8 545 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 H1FXQ92522 213 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 DUS3LQ96G46 650 aaKnown RBP3.93□□□□□ -1.78
TRA2B-215ENST00000492417 PLPPR2Q96GM1 343 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 OCSTAMPQ9BR26 566 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 SLC25A19Q9HC21 320 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 MSL2Q9HCI7 577 aa3.93□□□□□ -1.78
TRA2B-215ENST00000492417 REV1Q9UBZ9 1251 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms