RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 Q6ZSV7 163 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 KRT77Q7Z794 578 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 CMTM4Q8IZR5 234 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 BEND2Q8NDZ0 799 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF671Q8TAW3 534 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 OTULINQ96BN8 352 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 DUS3LQ96G46 650 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 MNTQ99583 582 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 MROQ9BYG7 248 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PBOV1Q9GZY1 135 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 HES4Q9HCC6 221 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 GPR84Q9NQS5 396 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PAPOLBQ9NRJ5 636 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 SLC25A10Q9UBX3 287 aaPredicted RBP6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 LAMP5Q9UJQ1 280 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 COPS3Q9UNS2 423 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 TMEM14AQ9Y6G1 99 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ZAR1LA6NP61 321 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 GYG2O15488 501 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 GSC2O15499 205 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 DHRS3O75911 302 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAJC8O75937 253 aaPredicted RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 TFF1P04155 84 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 FBP1P09467 338 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 CCL1P22362 96 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 EPHA2P29317 976 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 TGFBR2P37173 567 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ERVK11-1P61568 191 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 MFGE8Q08431 387 aaPredicted RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 RIPPLY1Q0D2K3 151 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ATP6AP1Q15904 470 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 MIDNQ504T8 468 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF684Q5T5D7 378 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 LCN1P1Q5VSP4 162 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 SLX4IPQ5VYV7 408 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 NXNL2Q5VZ03 156 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 NCR3LG1Q68D85 454 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 C12orf73Q69YU5 71 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 KDM4DQ6B0I6 523 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ACP7Q6ZNF0 438 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 MEPCEQ7L2J0 689 aaKnown RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 SPATA24Q86W54 205 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ELMOD2Q8IZ81 293 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 CD177Q8N6Q3 437 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 POC1AQ8NBT0 407 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNRF1Q8ND25 227 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 OR14K1Q8NGZ2 314 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 OR5K1Q8NHB7 308 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 OR51E1Q8TCB6 317 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 HIST1H2AAQ96QV6 131 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 NRIP2Q9BQI9 281 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 TEX12Q9BXU0 123 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 CADM1Q9BY67 442 aaKnown RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 MEGF9Q9H1U4 602 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 SEBOXQ9HB31 216 aaPredicted RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ADGRL4Q9HBW9 690 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 SIRT7Q9NRC8 400 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 SNTG1Q9NSN8 517 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 TVP23BQ9NYZ1 205 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAJB11Q9UBS4 358 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 CAB39Q9Y376 341 aaPredicted RBP6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 RNF114Q9Y508 228 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 V9GYS6 101 aa6.84□□□□□ -1.31
SMARCB1-207ENST00000491967 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 NOTCH3Q9UM47 2321 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PSMD9O00233 223 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 DLGAP1O14490 977 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 NRASP01111 189 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PGA5P0DJD9 388 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 FAHP16930 419 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 GLRA1P23415 457 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 EEF1B2P24534 225 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 SAA4P35542 130 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 RIDAP52758 137 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 DLX1P56177 255 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 EGR3Q06889 387 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 BNIP1Q12981 228 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF829Q3KNS6 432 aaPredicted RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PDLIM3Q53GG5 364 aaPredicted RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 CEP78Q5JTW2 689 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF322Q6U7Q0 402 aaPredicted RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 C17orf107Q6ZR85 190 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 THAP5Q7Z6K1 395 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 CALHM1Q8IU99 346 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PDZD9Q8IXQ8 264 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF561Q8N587 486 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 OR5D13Q8NGL4 314 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 OR5R1Q8NH85 324 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 TMEM163Q8TC26 289 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PIFOQ8TCI5 191 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 RNF166Q96A37 237 aaPredicted RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 CNN2Q99439 309 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 GABARAPL1Q9H0R8 117 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 SEMA6AQ9H2E6 1030 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms