RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 ZNF442Q9H7R0 627 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 CHRAC1Q9NRG0 131 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 ADA2Q9NZK5 511 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 FARSAQ9Y285 508 aaKnown RBP2.05□□□□□ -2.08
VTA1-204ENST00000491881 ATP10BO94823 1461 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 SUPT6HQ7KZ85 1726 aaKnown RBP2.05□□□□□ -2.08
VTA1-204ENST00000491881 ABCA3Q99758 1704 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 ZFYVE26Q68DK2 2539 aa2.05□□□□□ -2.08
VTA1-204ENST00000491881 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 CEACAM18A8MTB9 384 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 CENPBD1B2RD01 187 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 ADGRB2O60241 1585 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 SCELO95171 688 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 A2MP01023 1474 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 POLA1P09884 1462 aaPredicted RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 STAG3L3P0CL85 134 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 RALBP11234 206 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 PRKACBP22694 351 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 GDI2P50395 445 aaKnown RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 TAS2R43P59537 309 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 YWHAEP62258 255 aaKnown RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 RAB11AP62491 216 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 CAMSAP2Q08AD1 1489 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 RAB11BQ15907 218 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 ZMYM4Q5VZL5 1548 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 MFSD14CQ5VZR4 134 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 VIRMAQ69YN4 1812 aaKnown RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 DEGS2Q6QHC5 323 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 DENND4AQ7Z401 1863 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 TMCO2Q7Z6W1 182 aaPredicted RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 SLC35G3Q8N808 338 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 TMEM104Q8NE00 496 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 AGR3Q8TD06 166 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 GLYATL2Q8WU03 294 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 TMEM159Q96B96 161 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 CSPG4P5Q96PW8 444 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 ANP32EQ9BTT0 268 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 RBFOX1Q9NWB1 397 aaKnown RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 KIF26AQ9ULI4 1882 aaPredicted RBP2.04□□□□□ -2.08
VTA1-204ENST00000491881 NCOR2Q9Y618 2525 aa2.04□□□□□ -2.08
VTA1-204ENST00000491881 MYO3AQ8NEV4 1616 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 DNMBPQ6XZF7 1577 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 EFCAB5A4FU69 1503 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 ZZEF1O43149 2961 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 MAGI2Q86UL8 1455 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 WDR19Q8NEZ3 1342 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 A0A0A6YYD5 115 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 NCF1BA6NI72 391 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 NCF1CA8MVU1 366 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 ZBTB5O15062 677 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CTNSO60931 367 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OXTP01178 125 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 TRBV12-3P01733 135 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CATP04040 527 aaKnown RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 ASGR1P07306 291 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OR1G1P47890 313 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 ERFP50548 548 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OR1Q1Q15612 314 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 C5orf64Q2M2E5 130 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 KRTAP21-3Q3LHN1 58 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 C6orf99Q4VX62 202 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 MLIPQ5VWP3 458 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 TTC19Q6DKK2 380 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 MED27Q6P2C8 311 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 PRSS54Q6PEW0 395 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CMTM8Q8IZV2 173 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 KIF2BQ8N4N8 673 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 TRAM1L1Q8N609 369 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OR4M2Q8NGB6 313 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 OR1S1Q8NH92 325 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 KLF14Q8TD94 323 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 PIH1D2Q8WWB5 315 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 ISOC2Q96AB3 205 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CERS2Q96G23 380 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 ZFP3Q96NJ6 502 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 AGMATQ9BSE5 352 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 SFXN3Q9BWM7 321 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 C8orf33Q9H7E9 229 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 REEP1Q9H902 201 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CD209Q9NNX6 404 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 TREX1Q9NSU2 369 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 TAS2R5Q9NYW4 299 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 DHCR7Q9UBM7 475 aaKnown RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 ZNF257Q9Y2Q1 563 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 CNOT1A5YKK6 2376 aaKnown RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 VPS13AQ96RL7 3174 aa2.03□□□□□ -2.08
VTA1-204ENST00000491881 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
VTA1-204ENST00000491881 MAP1BP46821 2468 aaKnown RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 DEPDC5O75140 1603 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 LOC400499M0QZD8 3231 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 NEO1Q92859 1461 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 DMDP11532 3685 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 PIEZO2Q9H5I5 2752 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 ADGRA3Q8IWK6 1321 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 ZNF233A6NK53 670 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 H0YIV9 168 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 MYL12BO14950 172 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 LHBP01229 141 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 IGKV4-1P06312 121 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms