RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 KPTNQ9Y664 436 aa25.88■■□□□ 1.73
LDB1-204ENST00000490751 NRASP01111 189 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 KRT8P05787 483 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 CDONQ4KMG0 1287 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 HAGHLQ6PII5 290 aaPredicted RBP25.87■■□□□ 1.73
LDB1-204ENST00000490751 AQP3Q92482 292 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 DCTN5Q9BTE1 182 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 ONECUT1Q9UBC0 465 aa25.87■■□□□ 1.73
LDB1-204ENST00000490751 IGHV1-69DA0A0B4J2H0 117 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 A0A1B0GTI1 187 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 OR2AT4A6NND4 320 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 RPP14O95059 124 aaKnown RBP25.86■■□□□ 1.73
LDB1-204ENST00000490751 IGHV1-69P01742 117 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 IL13RA1P78552 427 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 DGUOKQ16854 277 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 ZNF684Q5T5D7 378 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 YIPF7Q8N8F6 280 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 ZNF671Q8TAW3 534 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 H1FXQ92522 213 aaKnown RBP25.86■■□□□ 1.73
LDB1-204ENST00000490751 TMIGD2Q96BF3 282 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 MED30Q96HR3 178 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 V9GYS6 101 aa25.86■■□□□ 1.73
LDB1-204ENST00000490751 A0A1W2PQL4 384 aaPredicted RBP25.85■■□□□ 1.73
LDB1-204ENST00000490751 OR2T7P0C7T2 308 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 KPNB1Q14974 876 aaKnown RBP25.85■■□□□ 1.73
LDB1-204ENST00000490751 CLVS2Q5SYC1 327 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 CCDC121Q6ZUS5 278 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 VMO1Q7Z5L0 202 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 OR10H4Q8NGA5 316 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 OR14K1Q8NGZ2 314 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 OR2T27Q8NH04 317 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 EME1Q96AY2 570 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 NOX4Q9NPH5 578 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 GPR173Q9NS66 373 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 ACOXLQ9NUZ1 547 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 SLC25A10Q9UBX3 287 aaPredicted RBP25.85■■□□□ 1.73
LDB1-204ENST00000490751 SLC22A13Q9Y226 551 aa25.85■■□□□ 1.73
LDB1-204ENST00000490751 SIGLEC5O15389 551 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 CDC42P60953 191 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 TMEM42Q69YG0 159 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 Q6YL49 198 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 PDZD9Q8IXQ8 264 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 DMRTB1Q96MA1 342 aa25.84■■□□□ 1.73
LDB1-204ENST00000490751 A0A1B0GVI7 797 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 H3BNX3 289 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 ACAA1P09110 424 aaPredicted RBP25.83■■□□□ 1.73
LDB1-204ENST00000490751 PSG2P11465 335 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 ATP6V1E1P36543 226 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 GABRA2P47869 451 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 C16orf87Q6PH81 154 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 C8orf46Q8TAG6 207 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 TAF15Q92804 592 aaKnown RBP eCLIP25.83■■□□□ 1.73
LDB1-204ENST00000490751 RFKQ969G6 155 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 TNFRSF19Q9NS68 423 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 PCDHGB1Q9Y5G3 927 aa25.83■■□□□ 1.73
LDB1-204ENST00000490751 IGKV1D-17A0A075B6S4 117 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 A6NIN4 97 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 METTL15A6NJ78 407 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 DLGAP1O14490 977 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 EI24O14681 340 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 ALPLP05186 524 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 TMED1Q13445 227 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 Q6ZSR3 168 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 CMTM4Q8IZR5 234 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 KIR3DL3Q8N743 410 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 IMPAD1Q9NX62 359 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 ZNF222Q9UK12 451 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 ORC6Q9Y5N6 252 aa25.82■■□□□ 1.72
LDB1-204ENST00000490751 MELTFP08582 738 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 NDUFB7P17568 137 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 ODF4Q2M2E3 257 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 CATSPERDQ86XM0 798 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 POC1AQ8NBT0 407 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 SIRT7Q9NRC8 400 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 USE1Q9NZ43 259 aa25.81■■□□□ 1.72
LDB1-204ENST00000490751 DHRS7CA6NNS2 312 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 CCL1P22362 96 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 HAAOP46952 286 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 CAV3P56539 151 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 ZFP1Q6P2D0 407 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 ZNF573Q86YE8 665 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 RORBQ92753 470 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 UBE2FQ969M7 185 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 ZNF488Q96MN9 340 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 ZNF747Q9BV97 191 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 RASL12Q9NYN1 266 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 MAB21L2Q9Y586 359 aa25.8■■□□□ 1.72
LDB1-204ENST00000490751 PQLC2LA1A4F0 135 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 J3QT63 122 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 SYNGR1O43759 233 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 SULT1C4O75897 302 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 ACP7Q6ZNF0 438 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 ZNRF1Q8ND25 227 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 TMEM185AQ8NFB2 350 aa25.79■■□□□ 1.72
LDB1-204ENST00000490751 TRUB1Q8WWH5 349 aaKnown RBP25.79■■□□□ 1.72
LDB1-204ENST00000490751 ELL3Q9HB65 397 aaPredicted RBP25.79■■□□□ 1.72
LDB1-204ENST00000490751 A0A0U1RQK1 487 aa25.78■■□□□ 1.72
LDB1-204ENST00000490751 H3BSH0 61 aa25.78■■□□□ 1.72
LDB1-204ENST00000490751 PRB3Q04118 309 aaPredicted RBP25.78■■□□□ 1.72
LDB1-204ENST00000490751 ZIK1Q3SY52 487 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms