RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PPP5D1E7EU14 171 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 OR1D5P58170 312 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 FAHD2BQ6P2I3 314 aaPredicted RBP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 LANCL3Q6ZV70 420 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 TMEM37Q8WXS4 190 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 HIST1H2BAQ96A08 127 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 FAHD2AQ96GK7 314 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 TIMP4Q99727 224 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 HDHD3Q9BSH5 251 aaPredicted RBP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 SARGQ9BW04 601 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 WASF3Q9UPY6 502 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 A0A087X0M5 115 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 A0A1B0GX30 115 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 SERPINA7P05543 415 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 ACAA1P09110 424 aaPredicted RBP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 CTHP32929 405 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 ARHGEF39Q8N4T4 335 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF611Q8N823 705 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 GJC3Q8NFK1 279 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 ESRP2Q9H6T0 727 aaKnown RBP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 FIGNL2A6NMB9 653 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 PLPP3O14495 311 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 CD1AP06126 327 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 DHODHQ02127 395 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 AADACL3Q5VUY0 350 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 DHRS7BQ6IAN0 325 aaPredicted RBP11.39□□□□□ -0.59
SHOX2-205ENST00000490689 SNX22Q96L94 193 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 DMRTA2Q96SC8 542 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 HINT2Q9BX68 163 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 PLA2G2FQ9BZM2 168 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 C19orf25Q9UFG5 118 aaPredicted RBP11.39□□□□□ -0.59
SHOX2-205ENST00000490689 H7BYZ3 331 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 M0R135 149 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 ISXQ2M1V0 245 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 ANKRD55Q3KP44 614 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 MCHR2Q969V1 340 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 TVP23CQ96ET8 276 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 ZNF799Q96GE5 643 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 IGKV1D-42A0A075B6H8 117 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 KLK3P07288 261 aaPredicted RBP11.39□□□□□ -0.59
SHOX2-205ENST00000490689 IAPPP10997 89 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
SHOX2-205ENST00000490689 NHLH2Q02577 135 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.39□□□□□ -0.59
SHOX2-205ENST00000490689 LYZL2Q7Z4W2 148 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 OR2AE1Q8NHA4 323 aa11.39□□□□□ -0.59
SHOX2-205ENST00000490689 CD8AP01732 235 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 SPINK2P20155 84 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 GPR3P46089 330 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 ZNF260Q3ZCT1 412 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 SLC26A10Q8NG04 563 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 MRPL38Q96DV4 380 aaKnown RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 MMACHCQ9Y4U1 282 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 CCDC187A0A096LP49 1063 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 TLCD2A6NGC4 264 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 IL11P20809 199 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 MST1P26927 711 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 FGF11Q92914 225 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 CLDN1O95832 211 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 ASAH2BP0C7U1 165 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 EDN3P14138 238 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 RPS4Y1P22090 263 aaKnown RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 ZNF133P52736 654 aaPredicted RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 THEM4Q5T1C6 240 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 WDR5BQ86VZ2 330 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 LRP11Q86VZ4 500 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 OR56B2PQ8NGI1 322 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 MENTQ9BUN1 341 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 A0A1W2PR80 420 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 C9J4A7 227 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 F10P00742 488 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 APOBEC1P41238 236 aaKnown RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 TNFRSF4P43489 277 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 NAAAQ02083 359 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 MRPL21Q7Z2W9 205 aaKnown RBP11.38□□□□□ -0.59
SHOX2-205ENST00000490689 UBALD1Q8TB05 177 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 FAM210BQ96KR6 192 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 CD207Q9UJ71 328 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 ST3GAL6Q9Y274 331 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 AUP1Q9Y679 476 aa11.38□□□□□ -0.59
SHOX2-205ENST00000490689 IGHV5-51A0A0C4DH38 117 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 CD79AP11912 226 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 COL9A1P20849 921 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 RBP2P50120 134 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
SHOX2-205ENST00000490689 FZD5Q13467 585 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 PNLIPRP3Q17RR3 467 aa11.37□□□□□ -0.59
SHOX2-205ENST00000490689 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
SHOX2-205ENST00000490689 SPANXN5Q5MJ07 72 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms