RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TAS2R5Q9NYW4 299 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 NGFP01138 241 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 COX6B1P14854 86 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 OMGP23515 440 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 FCGR2CP31995 323 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 DGCR2P98153 550 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 EXOGQ9Y2C4 368 aaKnown RBP12.67□□□□□ -0.38
ARHGEF39-205ENST00000490638 ZP4Q12836 540 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SUMF1Q8NBK3 374 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 FBXW5Q969U6 566 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 GALMQ96C23 342 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 PLEKHB1Q9UF11 243 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 PRSS50Q9UI38 385 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 TNFSF12O43508 249 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 PTP4A3O75365 173 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 ETV6P41212 452 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 GSK3AP49840 483 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 BCL2A1Q16548 175 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SSX8Q7RTT4 187 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 ITPKCQ96DU7 683 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 OR2M2Q96R28 347 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 WFDC6Q9BQY6 131 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 CXXC4Q9H2H0 198 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 HIPK2Q9H2X6 1198 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 PTPN13Q12923 2485 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 ZNF205O95201 554 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 ECI1P42126 302 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 CAMLGP49069 296 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 HOXA1P49639 335 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 CHCHD2Q9Y6H1 151 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 A0A1B0GUH1 482 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 CDIPTO14735 213 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 KLF7O75840 302 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 TBX6O95947 436 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 RPS2P15880 293 aaKnown RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 KIAA1456Q9P272 454 aa12.66□□□□□ -0.38
ARHGEF39-205ENST00000490638 ANKRD36A6QL64 1941 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 IFNA2P01563 188 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 CELA3AP09093 270 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 TGM1P22735 817 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 INSL4Q14641 139 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 ADAM5Q6NVV9 412 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 OR52N4Q8NGI2 321 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 GCM1Q9NP62 436 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 EVX1P49640 407 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 DEFA5Q01523 94 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 H2BFWTQ7Z2G1 175 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 WDSUB1Q8N9V3 476 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 C11orf54Q9H0W9 315 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 ONECUT1Q9UBC0 465 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 LRP5LA4QPB2 252 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 MSTNO14793 375 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 PI3P19957 117 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 OR8U1Q8NH10 309 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 RNF133Q8WVZ7 376 aa12.65□□□□□ -0.38
ARHGEF39-205ENST00000490638 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 FGF9P31371 208 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 HGDQ93099 445 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 M0R036 132 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 HNF4GQ14541 408 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 MOGAT3Q86VF5 341 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 RFX2P48378 723 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNF85Q03923 595 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 ASCL5Q7RTU5 278 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 CDC20BQ86Y33 519 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 FAM131CQ96AQ9 280 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 TAS2R3Q9NYW6 316 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 IFNA1P01562 189 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 MMP16P51512 607 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 CCL8P80075 99 aa12.64□□□□□ -0.39
ARHGEF39-205ENST00000490638 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms