RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 RAD1O60671 282 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ETHE1O95571 254 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CD2P06729 351 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CD55P08174 381 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C8orf88P0DMB2 117 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF14P17017 642 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TGFBR2P37173 567 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CXCR4P61073 352 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OSTNP61366 133 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 BTG1P62324 171 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TLE4Q04727 773 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SRYQ05066 204 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZNHIT3Q15649 155 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 UBE2V2Q15819 145 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TP53I3Q53FA7 332 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 DDI2Q5TDH0 399 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF691Q5VV52 312 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SAXO2Q658L1 398 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 UFSP1Q6NVU6 142 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NPSR1Q6W5P4 371 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SKA3Q8IX90 412 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 PRSS58Q8IYP2 241 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ENTHD1Q8IYW4 607 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FBXL14Q8N1E6 418 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 DNAJC22Q8N4W6 341 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR4F17Q8NGA8 305 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR5T3Q8NGG3 340 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR1S2Q8NGQ3 325 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR1B1Q8NGR6 318 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR2T4Q8NH00 348 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 DNAJB3Q8WWF6 145 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FAM122AQ96E09 287 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR4F4Q96R69 305 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 LGMNQ99538 433 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SDHCQ99643 169 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C2orf88Q9BSF0 95 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SELENOIQ9C0D9 397 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR51B6Q9H340 312 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 DUSP21Q9H596 190 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZFP57Q9NU63 452 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NUDT4Q9NZJ9 180 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 VAPAQ9P0L0 249 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 PAK5Q9P286 719 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 THAP10Q9P2Z0 257 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 MUTYHQ9UIF7 546 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SCN10AQ9Y5Y9 1956 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 hCG_1818297A0A087WSY0 165 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 IQCMA0A1B0GVH7 501 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TEX46H3BTG2 121 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SSNA1O43805 119 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FADS1O60427 444 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 RP2O75695 350 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SCELO95171 688 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 MPC2O95563 127 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SERPIND1P05546 499 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CRYBA1P05813 215 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ADRB3P13945 408 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CD1DP15813 335 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CCR7P32248 378 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 GSK3BP49841 420 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 RAB5CP51148 216 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 VSX2P58304 361 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ERVS71-1P61550 626 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SLC35A2P78381 396 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TRAM1Q15629 374 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TOMM34Q15785 309 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SLC22A6Q4U2R8 563 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SPSB3Q6PJ21 355 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ISCA2Q86U28 154 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NAA40Q86UY6 237 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 MCOLN2Q8IZK6 566 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 STPG2Q8N412 459 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 PNKDQ8N490 385 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TRAM1L1Q8N609 369 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NANOGP1Q8N7R0 232 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR13C3Q8NGS6 347 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM239Q8WW34 195 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NEIL2Q969S2 332 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NTAN1Q96AB6 310 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 KIAA1143Q96AT1 154 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C14orf144Q96I85 54 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CXorf58Q96LI9 332 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 REG4Q9BYZ8 158 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR51E2Q9H255 320 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF385DQ9H6B1 395 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 HEXA-AS1Q9H8Q6 139 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 GNB4Q9HAV0 340 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SCP2D1Q9UJQ7 156 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SLC22A14Q9Y267 594 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TP53TG5Q9Y2B4 290 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 GOLT1BQ9Y3E0 138 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ASTN1O14525 1302 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZFC3H1O60293 1989 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 E5RGE8 158 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SLC31A1O15431 190 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CHP2O43745 196 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms