RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 SF3B5Q9BWJ5 86 aaKnown RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 A0A1W2PQD3 144 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 GSTZ1O43708 216 aaPredicted RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 HSBP1O75506 76 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 SLC25A4P12235 298 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 PTTG1IPP53801 180 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 CTF1Q16619 201 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 BCDIN3DQ7Z5W3 292 aaKnown RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 SIRT6Q8N6T7 355 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 FBXW5Q969U6 566 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 FOXB1Q99853 325 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 TOLLIPQ9H0E2 274 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 RASL12Q9NYN1 266 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 DEDDO75618 318 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF385BQ569K4 471 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM108Q6UXF1 575 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 SLIRPQ9GZT3 109 aaKnown RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 SH2D2AQ9NP31 389 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 ARHGEF17Q96PE2 2063 aaPredicted RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF831Q5JPB2 1677 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 HTRA4P83105 476 aaPredicted RBP7.94□□□□□ -1.14
LSAMP-205ENST00000490035 OR6X1Q8NH79 312 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 GPBAR1Q8TDU6 330 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM231Q9H6L2 316 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 TBX21Q9UL17 535 aa7.94□□□□□ -1.14
LSAMP-205ENST00000490035 GABRA1P14867 456 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 FABP9Q0Z7S8 132 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 AANATQ16613 207 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CST9Q5W186 159 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 KIRREL2Q6UWL6 708 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 C20orf196Q8IYI0 205 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 TCTEX1D1Q8N7M0 179 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 SMIM14Q96QK8 99 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 hADV38S2A0JD32 116 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF320A2RRD8 509 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 SIRPB1O00241 398 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 AQP7O14520 342 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CCKARP32238 428 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 PAX5Q02548 391 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 KISS1Q15726 138 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 SMAD2Q15796 467 aaKnown RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 OR5AS1Q8N127 324 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 STPG2Q8N412 459 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 STXBP6Q8NFX7 210 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 PERPQ96FX8 193 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 ADAT1Q9BUB4 502 aaKnown RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF385DQ9H6B1 395 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 AMDHD2Q9Y303 409 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 MTCH2Q9Y6C9 303 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 GPANK1O95872 356 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 SRD5A2P31213 254 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 LILRA3Q8N6C8 439 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CLCF1Q9UBD9 225 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 M0R1B8 84 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 INHBBP09529 407 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 ASCL1P50553 236 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 RTN4RL1Q86UN2 441 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 SERTM2A0A1B0GWG4 89 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 DUXBA0A1W2PPF3 345 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 MYBPHQ13203 477 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CORO6Q6QEF8 472 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CLDN34H7C241 214 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 HRO43593 1189 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CD200P41217 278 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 IL24Q13007 206 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 B3GNTL1Q67FW5 361 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 CNRIP1Q96F85 164 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-205ENST00000490035 AUNIPQ9H7T9 357 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 FAM24AA6NFZ4 105 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM241Q24JQ0 296 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 PRICKLE4Q2TBC4 344 aa7.93□□□□□ -1.14
LSAMP-205ENST00000490035 WNK3Q9BYP7 1800 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 K7EQS6 105 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 FXYD1O00168 92 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 SSX7Q7RTT5 188 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 NFAM1Q8NET5 270 aaPredicted RBP7.92□□□□□ -1.14
LSAMP-205ENST00000490035 GPR119Q8TDV5 335 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 EXTL1Q92935 676 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 ISG20L2Q9H9L3 353 aaKnown RBP7.92□□□□□ -1.14
LSAMP-205ENST00000490035 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 ACTL6AO96019 429 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 OR2T2Q6IF00 324 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 DUSP18Q8NEJ0 188 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 M0QZK8 103 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 LANCL1O43813 399 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 GGCTO75223 188 aaKnown RBP7.92□□□□□ -1.14
LSAMP-205ENST00000490035 S100A4P26447 101 aaKnown RBP7.92□□□□□ -1.14
LSAMP-205ENST00000490035 OPRM1P35372 400 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 HFEQ30201 348 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM104Q8NE00 496 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 OR2M7Q8NG81 312 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 ZC3HAV1LQ96H79 300 aaKnown RBP7.92□□□□□ -1.14
LSAMP-205ENST00000490035 HES7Q9BYE0 225 aa7.92□□□□□ -1.14
LSAMP-205ENST00000490035 NAA60Q9H7X0 242 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms